RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 PTP4A2Q12974 167 aa20.27■□□□□ 0.84
SNX17-203ENST00000440760 GRIK3Q13003 919 aa20.27■□□□□ 0.84
SNX17-203ENST00000440760 SGO2Q562F6 1265 aa20.27■□□□□ 0.84
SNX17-203ENST00000440760 MEI1Q5TIA1 1274 aa20.27■□□□□ 0.84
SNX17-203ENST00000440760 OSTM1Q86WC4 334 aa20.27■□□□□ 0.84
SNX17-203ENST00000440760 ADGRF2Q8IZF7 708 aa20.27■□□□□ 0.84
SNX17-203ENST00000440760 PDCL2Q8N4E4 241 aa20.27■□□□□ 0.84
SNX17-203ENST00000440760 HASPINQ8TF76 798 aa20.27■□□□□ 0.84
SNX17-203ENST00000440760 PAWRQ96IZ0 340 aaKnown RBP20.27■□□□□ 0.84
SNX17-203ENST00000440760 TRIM7Q9C029 511 aa20.27■□□□□ 0.84
SNX17-203ENST00000440760 TJP2Q9UDY2 1190 aa20.27■□□□□ 0.84
SNX17-203ENST00000440760 SNX12Q9UMY4 172 aa20.27■□□□□ 0.84
SNX17-203ENST00000440760 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.27■□□□□ 0.84
SNX17-203ENST00000440760 A8MXQ7 604 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 F8W810 466 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 M0QYV0 167 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 MED7O43513 233 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 HUS1O60921 280 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 GJB6O95452 261 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 LSM8O95777 96 aaKnown RBP20.26■□□□□ 0.83
SNX17-203ENST00000440760 PDGFRBP09619 1106 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 UPP1Q16831 310 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 CCDC142Q17RM4 750 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 PHF13Q86YI8 300 aaPredicted RBP20.26■□□□□ 0.83
SNX17-203ENST00000440760 CPNE8Q86YQ8 564 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 TMEM35BQ8NCS4 154 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 FTHL17Q9BXU8 183 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 I3L4J1 428 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 CYB561D2O14569 222 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 VDRP11473 427 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 CTCFP49711 727 aaPredicted RBP20.26■□□□□ 0.83
SNX17-203ENST00000440760 CDR1P51861 262 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 NAA30Q147X3 362 aaPredicted RBP20.26■□□□□ 0.83
SNX17-203ENST00000440760 WSCD1Q658N2 575 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 DEFB128Q7Z7B8 93 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 SLFN11Q7Z7L1 901 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 TTC39CQ8N584 583 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 COG1Q8WTW3 980 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 UBN1Q9NPG3 1134 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 TSPAN16Q9UKR8 245 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 CEP83Q9Y592 693 aa20.26■□□□□ 0.83
SNX17-203ENST00000440760 MMP8P22894 467 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 CDH5P33151 784 aaPredicted RBP20.25■□□□□ 0.83
SNX17-203ENST00000440760 FAM189BP81408 668 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 GOLGA7BQ2TAP0 167 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 PPP1R26Q5T8A7 1209 aaPredicted RBP20.25■□□□□ 0.83
SNX17-203ENST00000440760 CYP4A22Q5TCH4 519 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 GLB1LQ6UWU2 654 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 PEX26Q7Z412 305 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 LIMS2Q7Z4I7 341 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 UBA3Q8TBC4 463 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 SEPT8Q92599 483 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 SENP8Q96LD8 212 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 OSBPL9Q96SU4 736 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 SNX25Q9H3E2 840 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 FAM124BQ9H5Z6 455 aaPredicted RBP20.25■□□□□ 0.83
SNX17-203ENST00000440760 TIMM13Q9Y5L4 95 aaPredicted RBP20.25■□□□□ 0.83
SNX17-203ENST00000440760 EOMESO95936 686 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 GATMP50440 423 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 HADHBP55084 474 aaKnown RBP20.25■□□□□ 0.83
SNX17-203ENST00000440760 MESDQ14696 234 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 PKN2Q16513 984 aaKnown RBP20.25■□□□□ 0.83
SNX17-203ENST00000440760 LRRC26Q2I0M4 334 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 PTPN20Q4JDL3 420 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 NT5DC3Q86UY8 548 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 TRIM11Q96F44 468 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 SMARCAL1Q9NZC9 954 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 EHD2Q9NZN4 543 aa20.25■□□□□ 0.83
SNX17-203ENST00000440760 MICAL3Q7RTP6 2002 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 ENPP3O14638 875 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 MTA2O94776 668 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 MYBL1P10243 752 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 CCDC130P13994 396 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 ACAT1P24752 427 aaKnown RBP20.24■□□□□ 0.83
SNX17-203ENST00000440760 GNL1P36915 607 aaPredicted RBP20.24■□□□□ 0.83
SNX17-203ENST00000440760 PSMC1P62191 440 aaKnown RBP20.24■□□□□ 0.83
SNX17-203ENST00000440760 C1QBPQ07021 282 aaKnown RBP20.24■□□□□ 0.83
SNX17-203ENST00000440760 TUSC3Q13454 348 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 TCEAL1Q15170 157 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 ZNF280BQ86YH2 543 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 TOP6BLQ8N6T0 577 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 MNS1Q8NEH6 495 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 TOX2Q96NM4 488 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 C11orf49Q9H6J7 331 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 AVENQ9NQS1 362 aaPredicted RBP20.24■□□□□ 0.83
SNX17-203ENST00000440760 ANAPC7Q9UJX3 599 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 TBX21Q9UL17 535 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 STXBP5LQ9Y2K9 1186 aa20.24■□□□□ 0.83
SNX17-203ENST00000440760 INPPL1O15357 1258 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 B3GAT3O94766 335 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 KIF4AO95239 1232 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 ITGB1P05556 798 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 BRCC3P46736 316 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 CNGA2Q16280 664 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 LIN9Q5TKA1 542 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 SMYD5Q6GMV2 418 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 UNC93AQ86WB7 457 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 SYCE1Q8N0S2 351 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 CPXM1Q96SM3 734 aa20.23■□□□□ 0.83
SNX17-203ENST00000440760 LHX5Q9H2C1 402 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms