RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 CCDC192P0DO97 292 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 GNL1P36915 607 aaPredicted RBP12.65□□□□□ -0.38
HSPG2-206ENST00000439717 TUFMP49411 452 aaKnown RBP12.65□□□□□ -0.38
HSPG2-206ENST00000439717 ZP2Q05996 745 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 PLD1Q13393 1074 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 NFE2Q16621 373 aaPredicted RBP12.65□□□□□ -0.38
HSPG2-206ENST00000439717 SLC39A12Q504Y0 691 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 INTS6LQ5JSJ4 861 aaKnown RBP12.65□□□□□ -0.38
HSPG2-206ENST00000439717 OSTM1Q86WC4 334 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 FBXL13Q8NEE6 735 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 SPPL2BQ8TCT7 592 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 KBTBD7Q8WVZ9 684 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 SLC35C1Q96A29 364 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 PGLYRP2Q96PD5 576 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 POMKQ9H5K3 350 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 MMRN2Q9H8L6 949 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 CDH9Q9ULB4 789 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 USTQ9Y2C2 406 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 NR2E1Q9Y466 385 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 INSL5Q9Y5Q6 135 aa12.65□□□□□ -0.38
HSPG2-206ENST00000439717 LOC730098B7Z3J9 87 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 CCL16O15467 120 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 N4BP1O75113 896 aaKnown RBP12.64□□□□□ -0.39
HSPG2-206ENST00000439717 CLSTN1O94985 981 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 DUSP4Q13115 394 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 MAPRE1Q15691 268 aaKnown RBP12.64□□□□□ -0.39
HSPG2-206ENST00000439717 CBWD6Q4V339 395 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 CBWD3Q5JTY5 395 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 CBWD5Q5RIA9 395 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 FAM171BQ6P995 826 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 SASS6Q6UVJ0 657 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 LRRTM3Q86VH5 581 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 GJD3Q8N144 294 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 ELMOD1Q8N336 334 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 OR6B3Q8NGW1 331 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 MED15Q96RN5 788 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 PKMYT1Q99640 499 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 MRPL45Q9BRJ2 306 aaKnown RBP12.64□□□□□ -0.39
HSPG2-206ENST00000439717 COL25A1Q9BXS0 654 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-206ENST00000439717 ABCB6Q9NP58 842 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 RAB20Q9NX57 234 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 CDH22Q9UJ99 828 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 POLIQ9UNA4 740 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 COQ4Q9Y3A0 265 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 PCDHB5Q9Y5E4 795 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 A0A0C4DFX4 3053 aa12.64□□□□□ -0.39
HSPG2-206ENST00000439717 CLUHO75153 1309 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 P4HA2O15460 535 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 PTPN2P17706 415 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 ACAT1P24752 427 aaKnown RBP12.63□□□□□ -0.39
HSPG2-206ENST00000439717 LMO2P25791 158 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 ALDH1A3P47895 512 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 FMO5P49326 533 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 NOP14P78316 857 aaKnown RBP12.63□□□□□ -0.39
HSPG2-206ENST00000439717 TWF1Q12792 350 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 CETN1Q12798 172 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 TPD52L1Q16890 204 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-206ENST00000439717 WDR44Q5JSH3 913 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 IQCEQ6IPM2 695 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 C4orf50Q6ZRC1 276 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 OTOP3Q7RTS5 596 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 GRASPQ7Z6J2 395 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-206ENST00000439717 TRIM59Q8IWR1 403 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 PLCD3Q8N3E9 789 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 ATAD1Q8NBU5 361 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 FEZF2Q8TBJ5 459 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 FUBP3Q96I24 572 aaKnown RBP eCLIP12.63□□□□□ -0.39
HSPG2-206ENST00000439717 RPGRIP1Q96KN7 1286 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 ZNF512Q96ME7 567 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-206ENST00000439717 NECAB3Q96P71 396 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-206ENST00000439717 SYT15Q9BQS2 421 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 NIF3L1Q9GZT8 377 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 CRISPLD1Q9H336 500 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 THAP9Q9H5L6 903 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 FAM124BQ9H5Z6 455 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-206ENST00000439717 SMYD3Q9H7B4 428 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 CYP3A43Q9HB55 503 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 AVENQ9NQS1 362 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-206ENST00000439717 ANO10Q9NW15 660 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 GTF3C4Q9UKN8 822 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 SLC27A5Q9Y2P5 690 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 YIPF1Q9Y548 306 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 ASB3Q9Y575 518 aa12.63□□□□□ -0.39
HSPG2-206ENST00000439717 TCF20Q9UGU0 1960 aaKnown RBP12.62□□□□□ -0.39
HSPG2-206ENST00000439717 MYBPHLA2RUH7 354 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 A8MXQ7 604 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 PDGFRBP09619 1106 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 HAPLN1P10915 354 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-206ENST00000439717 FSHRP23945 695 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 SSTR3P32745 418 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-206ENST00000439717 ASPAP45381 313 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 EPHB3P54753 998 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 CDH8P55286 799 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 STX1AQ16623 288 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 KLHL40Q2TBA0 621 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 MGAT5BQ3V5L5 792 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 CFAP221Q4G0U5 840 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 SPOPLQ6IQ16 392 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 UNC93AQ86WB7 457 aa12.62□□□□□ -0.39
HSPG2-206ENST00000439717 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms