RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 ZNF263O14978 683 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 MUTP22033 750 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 KLHL38Q2WGJ6 581 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 CCDC149Q6ZUS6 474 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 TRIM59Q8IWR1 403 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 RFFLQ8WZ73 363 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 ACSF2Q96CM8 615 aaPredicted RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 CDK5RAP1Q96SZ6 601 aaKnown RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 CGRRF1Q99675 332 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 OGFRQ9NZT2 677 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 CCDC195A0A1B0GUA6 201 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 FGBP02675 491 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 AXLP30530 894 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 ARSEP51690 589 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 RHOAP61586 193 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 APBA1Q02410 837 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 CUL2Q13617 745 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 PDK1Q15118 436 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 Q4G0T1 1027 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 SLC39A12Q504Y0 691 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 TREML2Q5T2D2 321 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 ANKRD23Q86SG2 305 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 ZNF410Q86VK4 478 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 CAPN10Q9HC96 672 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 ARHGEF38Q9NXL2 777 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 MRPS23Q9Y3D9 190 aaKnown RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 CBX4O00257 560 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 MRPS6P82932 125 aaKnown RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 TROAPQ12815 778 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 TSNAXIP1Q2TAA8 658 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 SMTNL2Q2TAL5 461 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 RNF10Q8N5U6 811 aaKnown RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 C1orf131Q8NDD1 294 aaKnown RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.66□□□□□ -0.38
NEK1-201ENST00000439128 SYT15Q9BQS2 421 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 SLC39A10Q9ULF5 831 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 PCDHB2Q9Y5E7 798 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 OCM2P0CE71 109 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 OCMP0CE72 109 aaPredicted RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 ACAT1P24752 427 aaKnown RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 EIF2B5Q13144 721 aaKnown RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 ZNF284Q2VY69 593 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 C4orf19Q8IY42 314 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 TNS4Q8IZW8 715 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 DAGLBQ8NCG7 672 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 ELMO2Q96JJ3 720 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 BTBD19C9JJ37 291 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 CCDC188H7C350 402 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 STX7O15400 261 aaKnown RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 HMOX2P30519 316 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 ARHGDIAP52565 204 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 SEMA3FQ13275 785 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 NT5DC4Q86YG4 428 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 PTPRN2Q92932 1015 aa12.66□□□□□ -0.38
NEK1-201ENST00000439128 USP13Q92995 863 aaPredicted RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 AKAP7Q9P0M2 348 aaPredicted RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 CPSF2Q9P2I0 782 aaKnown RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 PACSIN2Q9UNF0 486 aaPredicted RBP12.66□□□□□ -0.38
NEK1-201ENST00000439128 TBC1D3BA6NDS4 549 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 CTCFP49711 727 aaPredicted RBP12.65□□□□□ -0.38
NEK1-201ENST00000439128 STK4Q13043 487 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 P3H1Q32P28 736 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 CORO1BQ9BR76 489 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 NRCAMQ92823 1304 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 VWDEQ8N2E2 1590 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 ZW10O43264 779 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 NCK2O43639 380 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 MZF1P28698 734 aaPredicted RBP12.65□□□□□ -0.38
NEK1-201ENST00000439128 TYK2P29597 1187 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 CRLF3Q8IUI8 442 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 MIR1-1HGQ9H1L0 117 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 KDM4CQ9H3R0 1056 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 SELENONQ9NZV5 590 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 ZFATQ9P243 1243 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 CHRM3P20309 590 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 SPDYAQ5MJ70 313 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 CELF3Q5SZQ8 465 aaKnown RBP12.65□□□□□ -0.38
NEK1-201ENST00000439128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.65□□□□□ -0.38
NEK1-201ENST00000439128 RABGGTAQ92696 567 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 SLC4A9Q96Q91 983 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 AGPAT3Q9NRZ7 376 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 APRTP07741 180 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 MCF2P10911 925 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 TUFMP49411 452 aaKnown RBP12.65□□□□□ -0.38
NEK1-201ENST00000439128 PLPP4Q5VZY2 271 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 MOXD1Q6UVY6 613 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 CBWD2Q8IUF1 395 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 AHCYL2Q96HN2 611 aaKnown RBP12.65□□□□□ -0.38
NEK1-201ENST00000439128 PNMA5Q96PV4 448 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 SNCAIPQ9Y6H5 919 aa12.65□□□□□ -0.38
NEK1-201ENST00000439128 ARHGAP23Q9P227 1491 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 OTOP2Q7RTS6 562 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 LRRC43Q8N309 656 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 TOMM70O94826 608 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 VDRP11473 427 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 RGS4P49798 205 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 BCAT1P54687 386 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 CREMQ03060 361 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 RASGRP2Q7LDG7 609 aa12.64□□□□□ -0.39
NEK1-201ENST00000439128 UNC45BQ8IWX7 931 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms