RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 MBD3L4A6NDZ8 208 aaPredicted RBP4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 MBD3L3A6NE82 208 aaPredicted RBP4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 MARCH11A6NNE9 402 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 VPS4BO75351 444 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 SUN1O94901 812 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 IL18RAPO95256 599 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 IFIT2P09913 472 aaKnown RBP4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 SLC5A1P13866 664 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 MAKP20794 623 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 LRPAP1P30533 357 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 VAV2P52735 878 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 FAM189BP81408 668 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 TAP1Q03518 808 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 BRD3Q15059 726 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 PTPAQ15257 358 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 CYP2A13Q16696 494 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 ZXDCQ2QGD7 858 aaPredicted RBP4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 PREPLQ4J6C6 727 aaPredicted RBP4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 IL31Q6EBC2 164 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 SLC30A10Q6XR72 485 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 SPRED1Q7Z699 444 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 COL23A1Q86Y22 540 aaPredicted RBP4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 ARHGEF19Q8IW93 802 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 MPP5Q8N3R9 675 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 PSD4Q8NDX1 1056 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 ACRBPQ8NEB7 543 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 ZNF483Q8TF39 744 aaPredicted RBP4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 SNX19Q92543 992 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 MYD88Q99836 296 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 APOL5Q9BWW9 433 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 NAA15Q9BXJ9 866 aaKnown RBP4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 ZNF341Q9BYN7 854 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 SMURF2Q9HAU4 748 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 TBCCD1Q9NVR7 557 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 DKK2Q9UBU2 259 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 PADI4Q9UM07 663 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 DMTF1Q9Y222 760 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 MAP3K2Q9Y2U5 619 aa4.63□□□□□ -1.67
LSM1P1-201ENST00000438629 TRGV11A0A075B6L2 103 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 F5H697 171 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 INMTO95050 263 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 NR4A1P22736 598 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 KLRC1P26715 233 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 PIK3CBP42338 1070 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 GCLCP48506 637 aaPredicted RBP4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 LOXL3P58215 753 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 BTKQ06187 659 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 DAG1Q14118 895 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 INSCQ1MX18 579 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 MGAT5BQ3V5L5 792 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 ABHD17BQ5VST6 288 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 TAF2Q6P1X5 1199 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 KCNV1Q6PIU1 500 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 TMPRSS9Q7Z410 1059 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 SAMD3Q8N6K7 520 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 NSUN7Q8NE18 718 aaKnown RBP4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 SLC46A1Q96NT5 459 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 OSBPL9Q96SU4 736 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 TBCBQ99426 244 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 ELAC2Q9BQ52 826 aaKnown RBP4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 BRIP1Q9BX63 1249 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 PHTF1Q9UMS5 762 aa4.62□□□□□ -1.67
LSM1P1-201ENST00000438629 A0A0B4J269 797 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 CCDC78A2IDD5 438 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 PYCARD-AS1I3L0S3 204 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 NPTX2P47972 431 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 PXNP49023 591 aaPredicted RBP4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 NDUFV1P49821 464 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 NEK3P51956 506 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 ZNF543Q08ER8 600 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 TUBB3Q13509 450 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 C3orf38Q5JPI3 329 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 DBX2Q6ZNG2 339 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 RHOUQ7L0Q8 258 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 SESTD1Q86VW0 696 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 MICU3Q86XE3 530 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 GAS2L3Q86XJ1 694 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 YAF2Q8IY57 180 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 ADGRG5Q8IZF4 528 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 PROKR1Q8TCW9 393 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 SMCR8Q8TEV9 937 aaPredicted RBP4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 SPSB4Q96A44 273 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 NACC2Q96BF6 587 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 CCDC138Q96M89 665 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 PTDSS2Q9BVG9 487 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 COLEC11Q9BWP8 271 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 MS4A7Q9GZW8 240 aaPredicted RBP4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 VPS11Q9H270 941 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 UNKLQ9H9P5 680 aaKnown RBP4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 NLRC4Q9NPP4 1024 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 XPNPEP3Q9NQH7 507 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 STARD7Q9NQZ5 370 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 STK32BQ9NY57 414 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 GPRC5BQ9NZH0 403 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 COL20A1Q9P218 1284 aa4.61□□□□□ -1.67
LSM1P1-201ENST00000438629 CENPVL1A0A0U1RR11 272 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 PIPSLA2A3N6 862 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 THAP12O43422 761 aa4.6□□□□□ -1.67
LSM1P1-201ENST00000438629 RASSF9O75901 435 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms