RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ARHGEF19Q8IW93 802 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 ICA1LQ8NDH6 482 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 CSRNP1Q96S65 589 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 OXCT2Q9BYC2 517 aaPredicted RBP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 CIDEBQ9UHD4 219 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 MTO1Q9Y2Z2 717 aaKnown RBP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 LOC100653049A0A140TA62 436 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PRPF4O43172 522 aaKnown RBP eCLIP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 TYROBPO43914 113 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PEX1O43933 1283 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 KRT34O76011 436 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 MAPK4P31152 587 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PSMC2P35998 433 aaKnown RBP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PEX6Q13608 980 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PTK6Q13882 451 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 TFDP1Q14186 410 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 CCDC89Q8N998 374 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 GIPC3Q8TF64 312 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 LZICQ8WZA0 190 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 SLC35B4Q969S0 331 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 KCNK13Q9HB14 408 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 FRMPD4Q14CM0 1322 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 RICTORQ6R327 1708 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PDXKO00764 312 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PDGFRBP09619 1106 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 C6orf222P0C671 652 aaPredicted RBP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 KRT10P13645 584 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 RXRGP48443 463 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 EMP3P54852 163 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 GAD2Q05329 585 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 TMCO4Q5TGY1 634 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 GALNT4Q8N4A0 578 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 C10orf88Q9H8K7 445 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 A0A1B0GTW7 788 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 XPO1O14980 1071 aaKnown RBP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 E2F6O75461 281 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 TCEA3O75764 348 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 TM7SF2O76062 418 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 HOXD12P35452 270 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 OXCT1P55809 520 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 ALCAMQ13740 583 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 SKA1Q96BD8 255 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 ACAP3Q96P50 834 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 S100A14Q9HCY8 104 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 ARHGEF4Q9NR80 690 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 EURLQ9NYK6 297 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 DNM3Q9UQ16 869 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 FSCN2O14926 492 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 ATP9BO43861 1147 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 COL6A2P12110 1019 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 SLC5A2P31639 672 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 ZNF804AQ7Z570 1209 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 SLC47A2Q86VL8 602 aa7.83□□□□□ -1.16
CPSF6-202ENST00000435070 PRICKLE1Q96MT3 831 aaPredicted RBP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 RBMX2Q9Y388 322 aaKnown RBP7.83□□□□□ -1.16
CPSF6-202ENST00000435070 LPXNO60711 386 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 TRMUO75648 421 aaKnown RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 RAG1P15918 1043 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 ATF7P17544 494 aaPredicted RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 NFKBIAP25963 317 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 HIC1Q14526 733 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 ANKRD20A4Q4UJ75 823 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 TMEM53Q6P2H8 277 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 NET1Q7Z628 596 aaPredicted RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 RNF169Q8NCN4 708 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 GRK7Q8WTQ7 553 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 DCUN1D5Q9BTE7 237 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 ANLNQ9NQW6 1124 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 SELENONQ9NZV5 590 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 MARF1Q9Y4F3 1742 aaKnown RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 H0YIN7 160 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 TGFB1I1O43294 461 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 SORBS3O60504 671 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 CAPN15O75808 1086 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 ZMPSTE24O75844 475 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 ZFXP17010 805 aaPredicted RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 ENTPD1P49961 510 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 TLR1Q15399 786 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 ANKDD1AQ495B1 522 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 NOP9Q86U38 636 aaKnown RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 CATSPER3Q86XQ3 398 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 FAM172AQ8WUF8 416 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 WDR37Q9Y2I8 494 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 DUOX1Q9NRD9 1551 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 PLSCR1O15162 318 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 CAMTA2O94983 1202 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 DLDP09622 509 aaKnown RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 MSX2P35548 267 aaPredicted RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 ARSEP51690 589 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 GEMIN4P57678 1058 aaKnown RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 DLG4P78352 724 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 LPIN1Q14693 890 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 PRR16Q569H4 304 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 SRPK1Q96SB4 655 aaKnown RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 EYA3Q99504 573 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 FERMT1Q9BQL6 677 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 PSMC3IPQ9P2W1 217 aaPredicted RBP7.82□□□□□ -1.16
CPSF6-202ENST00000435070 INPP5FQ9Y2H2 1132 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 FRMD4BQ9Y2L6 1034 aa7.82□□□□□ -1.16
CPSF6-202ENST00000435070 ZBTB39O15060 712 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms