RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 MGAT5Q09328 741 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 RRP1BQ14684 758 aaKnown RBP8.53□□□□□ -1.04
VTI1A-202ENST00000432306 SIX1Q15475 284 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-202ENST00000432306 ASPRV1Q53RT3 343 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 KIAA1614Q5VZ46 1190 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 CGB2Q6NT52 195 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 SLC30A9Q6PML9 568 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 TRAF7Q6Q0C0 670 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 MTHFD1LQ6UB35 978 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 PPP1R21Q6ZMI0 780 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 SYDE1Q6ZW31 735 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-202ENST00000432306 TTC30AQ86WT1 665 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 ZNF444Q8N0Y2 327 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-202ENST00000432306 RIBC1Q8N443 379 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-202ENST00000432306 ASAP3Q8TDY4 903 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 CTNNBL1Q8WYA6 563 aaPredicted RBP8.53□□□□□ -1.04
VTI1A-202ENST00000432306 ALG3Q92685 438 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 ARHGEF2Q92974 986 aaKnown RBP8.53□□□□□ -1.04
VTI1A-202ENST00000432306 CD101Q93033 1021 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 FAM136AQ96C01 138 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 NELL2Q99435 816 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 SPON2Q9BUD6 331 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 NIF3L1Q9GZT8 377 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 GLT8D2Q9H1C3 349 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 IL21Q9HBE4 155 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 OLFML3Q9NRN5 406 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 AASDHPPTQ9NRN7 309 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 FGFR1OP2Q9NVK5 253 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 USP20Q9Y2K6 914 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 SNX24Q9Y343 169 aa8.53□□□□□ -1.04
VTI1A-202ENST00000432306 EME2A4GXA9 379 aaPredicted RBP8.52□□□□□ -1.05
VTI1A-202ENST00000432306 TCP11X1B4DZS4 312 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 K7ENM7 598 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 PDLIM1O00151 329 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 EIF3DO15371 548 aaKnown RBP eCLIP8.52□□□□□ -1.05
VTI1A-202ENST00000432306 SKAP2O75563 359 aaPredicted RBP8.52□□□□□ -1.05
VTI1A-202ENST00000432306 AKAP3O75969 853 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 RTN3O95197 1032 aaPredicted RBP8.52□□□□□ -1.05
VTI1A-202ENST00000432306 PRDX5P30044 214 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 HIBADHP31937 336 aaKnown RBP8.52□□□□□ -1.05
VTI1A-202ENST00000432306 HOXD13P35453 343 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 TM4SF4P48230 202 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 RXRGP48443 463 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 PAPOLAP51003 745 aaKnown RBP8.52□□□□□ -1.05
VTI1A-202ENST00000432306 CAV1Q03135 178 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 SREBF2Q12772 1141 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 LAMC2Q13753 1193 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 RASA2Q15283 850 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 HERC4Q5GLZ8 1057 aaPredicted RBP8.52□□□□□ -1.05
VTI1A-202ENST00000432306 ARHGEF18Q6ZSZ5 1173 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 SESTD1Q86VW0 696 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 UBL4BQ8N7F7 174 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 SYT2Q8N9I0 419 aaPredicted RBP8.52□□□□□ -1.05
VTI1A-202ENST00000432306 RNF217Q8TC41 542 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 ZNF398Q8TD17 642 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 EPS8L3Q8TE67 593 aaKnown RBP8.52□□□□□ -1.05
VTI1A-202ENST00000432306 PIGOQ8TEQ8 1089 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 GLG1Q92896 1179 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 TBATAQ96M53 351 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 TRAPPC9Q96Q05 1148 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 PIGSQ96S52 555 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 ZSWIM1Q9BR11 485 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 CCDC28BQ9BUN5 200 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 OSBPL1AQ9BXW6 950 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 GPR88Q9GZN0 384 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 ANKRD2Q9GZV1 360 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 WNT8AQ9H1J5 351 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 RANBP17Q9H2T7 1088 aaKnown RBP8.52□□□□□ -1.05
VTI1A-202ENST00000432306 DHX36Q9H2U1 1008 aaKnown RBP8.52□□□□□ -1.05
VTI1A-202ENST00000432306 OSGEPQ9NPF4 335 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 UBN1Q9NPG3 1134 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 AAASQ9NRG9 546 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 ZNF180Q9UJW8 692 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 AJAP1Q9UKB5 411 aaPredicted RBP8.52□□□□□ -1.05
VTI1A-202ENST00000432306 CEP290O15078 2479 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 ASTN1O14525 1302 aa8.52□□□□□ -1.05
VTI1A-202ENST00000432306 VSTM5A8MXK1 200 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 ABHD2P08910 425 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 GSTA2P09210 222 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 ITIH2P19823 946 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 MUTP22033 750 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 COILP38432 576 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 SOX9P48436 509 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 RASSF2P50749 326 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 RPS6KA3P51812 740 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 POLGP54098 1239 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 ZNF280AP59817 542 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 GSTO1P78417 241 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 MOGSQ13724 837 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 GIT2Q14161 759 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 TAF1CQ15572 869 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 NUGGCQ68CJ6 796 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 LMBRD2Q68DH5 695 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 IRGCQ6NXR0 463 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 TTC27Q6P3X3 843 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 CCDC137Q6PK04 289 aaKnown RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 ZDHHC14Q8IZN3 488 aa8.51□□□□□ -1.05
VTI1A-202ENST00000432306 U2AF1L4Q8WU68 220 aaKnown RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 PRCCQ92733 491 aaPredicted RBP8.51□□□□□ -1.05
VTI1A-202ENST00000432306 NINJ1Q92982 152 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms