RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 LRRC6Q86X45 466 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 CCDC60Q8IWA6 550 aaPredicted RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 FAR2Q96K12 515 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 MKNK1Q9BUB5 465 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 MRPS26Q9BYN8 205 aaKnown RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 DMAP1Q9NPF5 467 aaPredicted RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 ABCF3Q9NUQ8 709 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 UBAP1Q9NZ09 502 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 TFR2Q9UP52 801 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 MICAL3Q7RTP6 2002 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 EIF3DO15371 548 aaKnown RBP eCLIP6.45□□□□□ -1.382e-6■■■□□ 17.7
CHD8-202ENST00000430710 CTDNEP1O95476 244 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 KCNA2P16389 499 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 NFKBIAP25963 317 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 HOXA13P31271 388 aaPredicted RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 HADHAP40939 763 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 TAF2Q6P1X5 1199 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 PPHLN1Q8NEY8 458 aaKnown RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 GLMNQ92990 594 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 ATXN7L3BQ96GX2 97 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 ZFYVE19Q96K21 471 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 FAM111AQ96PZ2 611 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 GORASP1Q9BQQ3 440 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 TMEM117Q9H0C3 514 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 CDC42EP4Q9H3Q1 356 aaKnown RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 TASP1Q9H6P5 420 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 RABGEF1Q9UJ41 708 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 HPSEQ9Y251 543 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 EFCAB6Q5THR3 1501 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 LOC100653049A0A140TA62 436 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 GSG1L2A8MUP6 293 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 ZSCAN9O15535 394 aaPredicted RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 PSTPIP1O43586 416 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 GLRA3O75311 464 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 KRT34O76011 436 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 SFNP31947 248 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 ST13P50502 369 aaKnown RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 GPC3P51654 580 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 MAPK6Q16659 721 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 GSTA3Q16772 222 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 EFHC2Q5JST6 749 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 EFL1Q7Z2Z2 1120 aaKnown RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 CD302Q8IX05 232 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 C18orf8Q96DM3 657 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 VPS50Q96JG6 964 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 BBS2Q9BXC9 721 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 FBXL21Q9UKT6 434 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 COMMD3-BMI1R4GMX3 469 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 CAMSAP1Q5T5Y3 1602 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 PLA2R1Q13018 1463 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 ITSN1Q15811 1721 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 CFAP99D6REC4 459 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 TRIM24O15164 1050 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 IGKV5-2P06315 115 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 GLI1P08151 1106 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 QARSP47897 775 aaKnown RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 ATXN3P54252 364 aaPredicted RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 PTENP60484 403 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 MEI1Q5TIA1 1274 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 KLHDC7AQ5VTJ3 777 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 TMEM79Q9BSE2 394 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 TMEM120AQ9BXJ8 343 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 DHX35Q9H5Z1 703 aaKnown RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 ELP3Q9H9T3 547 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 KCND2Q9NZV8 630 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 COPG2Q9UBF2 871 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 PCDHGB4Q9UN71 923 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 AGRPO00253 132 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 TNPO2O14787 897 aaKnown RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 SLC16A4O15374 487 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 POLBP06746 335 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 P4HBP07237 508 aaKnown RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 CNTFP26441 200 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 SNRPFP62306 86 aaKnown RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 ZNF844Q08AG5 666 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 SYCP2LQ5T4T6 812 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 TMC3Q7Z5M5 1100 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 C1orf131Q8NDD1 294 aaKnown RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 OR6B3Q8NGW1 331 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 SLC30A5Q8TAD4 765 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 SPATA18Q8TC71 538 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 PARD3BQ8TEW8 1205 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 OMA1Q96E52 524 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 NR1H4Q96RI1 486 aaPredicted RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 ZSWIM1Q9BR11 485 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 CD209Q9NNX6 404 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 FAM32AQ9Y421 112 aaKnown RBP6.45□□□□□ -1.38
CHD8-202ENST00000430710 DUSP10Q9Y6W6 482 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 MROH7Q68CQ1 1323 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 ABCA6Q8N139 1617 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 OVOS2A0A0G2JMS6 1433 aa6.45□□□□□ -1.38
CHD8-202ENST00000430710 MYMKA6NI61 221 aa6.44□□□□□ -1.38
CHD8-202ENST00000430710 M0QYV0 167 aa6.44□□□□□ -1.38
CHD8-202ENST00000430710 DNALI1O14645 258 aaPredicted RBP6.44□□□□□ -1.38
CHD8-202ENST00000430710 PLEKP08567 350 aaPredicted RBP6.44□□□□□ -1.38
CHD8-202ENST00000430710 PEX5P50542 639 aa6.44□□□□□ -1.38
CHD8-202ENST00000430710 OSTNP61366 133 aa6.44□□□□□ -1.38
CHD8-202ENST00000430710 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.44□□□□□ -1.38
CHD8-202ENST00000430710 OVGP1Q12889 678 aa6.44□□□□□ -1.38
CHD8-202ENST00000430710 MTMR1Q13613 665 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms