RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 DAB2IPQ5VWQ8 1189 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 GPAT2Q6NUI2 795 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 CHSY1Q86X52 802 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 SLC16A10Q8TF71 515 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 GPR63Q9BZJ6 419 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 CNTNAP5Q8WYK1 1306 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 HEATR9A2RTY3 570 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 EIF3HO15372 352 aaKnown RBP eCLIP13.34□□□□□ -0.27
LDB3-205ENST00000429277 TDRD10Q5VZ19 366 aaKnown RBP13.34□□□□□ -0.27
LDB3-205ENST00000429277 CLEC4FQ8N1N0 589 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 HPDLQ96IR7 371 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 SEPT5Q99719 369 aaPredicted RBP13.34□□□□□ -0.27
LDB3-205ENST00000429277 SCN3BQ9NY72 215 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 USP27XA6NNY8 438 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 AKAP10O43572 662 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 DAB1O75553 588 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 COMTP21964 271 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 SLC11A2P49281 568 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 NCKAP1LP55160 1127 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 PPP4CP60510 307 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 COBLL1Q53SF7 1204 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 ZNF484Q5JVG2 852 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 PPP4R4Q6NUP7 873 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 ARMC6Q6NXE6 501 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 OOSP2Q86WS3 158 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 SNX31Q8N9S9 440 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 ZNF473Q8WTR7 871 aaKnown RBP13.34□□□□□ -0.27
LDB3-205ENST00000429277 DTNBP1Q96EV8 351 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 PCMTD2Q9NV79 361 aa13.34□□□□□ -0.27
LDB3-205ENST00000429277 CNTNAP4Q9C0A0 1308 aa13.33□□□□□ -0.27
LDB3-205ENST00000429277 TRPC1P48995 793 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 SKIV2LQ15477 1246 aaKnown RBP13.33□□□□□ -0.28
LDB3-205ENST00000429277 GOLGA7BQ2TAP0 167 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 MGAT5BQ3V5L5 792 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 WLSQ5T9L3 541 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 TEX9Q8N6V9 391 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 EME1Q96AY2 570 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 CHP1Q99653 195 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 ZNF518BQ9C0D4 1074 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 ADNPQ9H2P0 1102 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 JMJD4Q9H9V9 463 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 APPL1Q9UKG1 709 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 CST8O60676 142 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 GUCY1A3Q02108 690 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 TWF1Q12792 350 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 C3orf62Q6ZUJ4 267 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 RNF180Q86T96 592 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 USP38Q8NB14 1042 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 C3orf20Q8ND61 904 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 KCNV2Q8TDN2 545 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 THAP11Q96EK4 314 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 SERPINB12Q96P63 405 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 ALG6Q9Y672 507 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 KDM6BO15054 1643 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 ZNF157P51786 506 aaPredicted RBP13.33□□□□□ -0.28
LDB3-205ENST00000429277 MTA1Q13330 715 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 TIGD7Q6NT04 549 aaPredicted RBP13.33□□□□□ -0.28
LDB3-205ENST00000429277 MRNIPQ6NTE8 343 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 ANKS1AQ92625 1134 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 CYFIP2Q96F07 1278 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 TRIM51Q9BSJ1 452 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 TMEM51Q9NW97 253 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.33□□□□□ -0.28
LDB3-205ENST00000429277 ZDHHC9Q9Y397 364 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 PDGFRBP09619 1106 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 ENO3P13929 434 aaPredicted RBP13.33□□□□□ -0.28
LDB3-205ENST00000429277 STX5Q13190 355 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 DCAF6Q58WW2 860 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 CAPRIN2Q6IMN6 1127 aaKnown RBP13.33□□□□□ -0.28
LDB3-205ENST00000429277 AGR3Q8TD06 166 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 DTX3LQ8TDB6 740 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 TFB1MQ8WVM0 346 aaKnown RBP13.33□□□□□ -0.28
LDB3-205ENST00000429277 CCT8L2Q96SF2 557 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 TUBGCP4Q9UGJ1 667 aa13.33□□□□□ -0.28
LDB3-205ENST00000429277 ETFBP38117 255 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 FMR1Q06787 632 aaKnown RBP eCLIP13.32□□□□□ -0.28
LDB3-205ENST00000429277 PDK2Q15119 407 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 TRIM65Q6PJ69 517 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 ZNF467Q7Z7K2 595 aaPredicted RBP13.32□□□□□ -0.28
LDB3-205ENST00000429277 E2F7Q96AV8 911 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 NPHS2Q9NP85 383 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 KLHL11Q9NVR0 708 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 CHMP2BQ9UQN3 213 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 AAR2Q9Y312 384 aaKnown RBP13.32□□□□□ -0.28
LDB3-205ENST00000429277 CD163L1Q9NR16 1453 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 CDC42BPBQ9Y5S2 1711 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 SETBP1Q9Y6X0 1596 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 MAP3K13O43283 966 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 FKBP9O95302 570 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 CTSHP09668 335 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 GEMIN4P57678 1058 aaKnown RBP13.32□□□□□ -0.28
LDB3-205ENST00000429277 CCZ1BP86790 482 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 CCZ1P86791 482 aaPredicted RBP13.32□□□□□ -0.28
LDB3-205ENST00000429277 MTF1Q14872 753 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 ACAD10Q6JQN1 1059 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 FKBP9P1Q75LS8 142 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 ADCK1Q86TW2 530 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 PLD3Q8IV08 490 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 USP33Q8TEY7 942 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 UCMAQ8WVF2 138 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms