RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 SLC16A1P53985 500 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 KLRC3Q07444 240 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ORC2Q13416 577 aaPredicted RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 TRIM69Q86WT6 500 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 HORMAD1Q86X24 394 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CCDC197Q8NCU1 140 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ZNF555Q8NEP9 628 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 REXO5Q96IC2 774 aaKnown RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 DEPDC7Q96QD5 511 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ARHGAP9Q9BRR9 750 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 PRRG4Q9BZD6 226 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CCDC90BQ9GZT6 254 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 TUFT1Q9NNX1 390 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 SPATA31A3Q5VYP0 1347 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 MROH7Q68CQ1 1323 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ADAMTS12P58397 1594 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 A0A0D9SFI3 127 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 FAM196BA6NMK8 535 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 F8W810 466 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 H7C1W4 665 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 RECKO95980 971 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 MMP1P03956 469 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 WEE1P30291 646 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CLK1P49759 484 aaKnown RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 TAF6P49848 677 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ZBED6P86452 979 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 BYSLQ13895 437 aaKnown RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 ARSJQ5FYB0 599 aaPredicted RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 ATF7IP2Q5U623 682 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 PI16Q6UXB8 463 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 AGMOQ6ZNB7 445 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 TRIM74Q86UV6 250 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 TRIM73Q86UV7 250 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 GAS2L3Q86XJ1 694 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 SLC25A41Q8N5S1 370 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ZNF507Q8TCN5 953 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 PPP1R16AQ96I34 528 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 IDI2Q9BXS1 227 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 MROH8Q9H579 483 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ZNF304Q9HCX3 659 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 PCMTD2Q9NV79 361 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 SPG21Q9NZD8 308 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CPA4Q9UI42 421 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 VPS51Q9UID3 782 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CFAP65Q6ZU64 1925 aaKnown RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 IGSF9BQ9UPX0 1349 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ADGRL3Q9HAR2 1447 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 A0A087WZ62 844 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 VWA5AO00534 786 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 PEX1O43933 1283 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CCDC130P13994 396 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CTNNB1P35222 781 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 DEFB115Q30KQ5 88 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ALS2CLQ60I27 953 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 KIAA1324Q6UXG2 1013 aaKnown RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 DGKHQ86XP1 1220 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ZNF248Q8NDW4 579 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CEP70Q8NHQ1 597 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 RAD54LQ92698 747 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 NUDT16L1Q9BRJ7 211 aaKnown RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 IER2Q9BTL4 223 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 UBXN6Q9BZV1 441 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 NMRK2Q9NPI5 230 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 HPS4Q9NQG7 708 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 PRMT7Q9NVM4 692 aaPredicted RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 MKS1Q9NXB0 559 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 USP18Q9UMW8 372 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 POLR1DQ9Y2S0 133 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CAB39Q9Y376 341 aaPredicted RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 CLIC4Q9Y696 253 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 RPTORQ8N122 1335 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 A0A088AWK7 358 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 SH2B2O14492 632 aaPredicted RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 MSCO60682 206 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 NR3C1P04150 777 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 ZNF10P21506 573 aaPredicted RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 GCLMP48507 274 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 CDH6P55285 790 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 FXNQ16595 210 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 SHROOM1Q2M3G4 852 aaPredicted RBP5.98□□□□□ -1.45
HERC4-206ENST00000427635 FAM162AQ96A26 154 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.98□□□□□ -1.45
HERC4-206ENST00000427635 USP6P35125 1406 aa5.98□□□□□ -1.45
HERC4-206ENST00000427635 PODXLO00592 558 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 RASSF9O75901 435 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 NUDT14O95848 222 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 AGR2O95994 175 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CYP2A6P11509 494 aaPredicted RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 FGFR2P21802 821 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 CCND1P24385 295 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 STIP1P31948 543 aaKnown RBP5.97□□□□□ -1.45
HERC4-206ENST00000427635 CYP2C19P33261 490 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 THOP1P52888 689 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 PTK6Q13882 451 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 EFHC1Q5JVL4 640 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 KLHL24Q6TFL4 600 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 SFR1Q86XK3 245 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 BRSK2Q8IWQ3 736 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 OR8H2Q8N162 312 aa5.97□□□□□ -1.45
HERC4-206ENST00000427635 AGBL3Q8NEM8 1001 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms