RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 DCP1BQ8IZD4 617 aaKnown RBP26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 CCDC150Q8NCX0 1101 aa26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 FEZF2Q8TBJ5 459 aa26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 PHF7Q9BWX1 381 aaPredicted RBP26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 POMKQ9H5K3 350 aa26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 TMEM63CQ9P1W3 806 aa26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 POLIQ9UNA4 740 aa26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 INSL5Q9Y5Q6 135 aa26.93■■□□□ 1.9
HERPUD2-205ENST00000427455 XYLBO75191 536 aa26.92■■□□□ 1.9
HERPUD2-205ENST00000427455 VNN2O95498 520 aa26.92■■□□□ 1.9
HERPUD2-205ENST00000427455 CBWD6Q4V339 395 aa26.92■■□□□ 1.9
HERPUD2-205ENST00000427455 INTS6LQ5JSJ4 861 aaKnown RBP26.92■■□□□ 1.9
HERPUD2-205ENST00000427455 CBWD3Q5JTY5 395 aa26.92■■□□□ 1.9
HERPUD2-205ENST00000427455 CBWD5Q5RIA9 395 aa26.92■■□□□ 1.9
HERPUD2-205ENST00000427455 SASS6Q6UVJ0 657 aa26.92■■□□□ 1.9
HERPUD2-205ENST00000427455 ADHFE1Q8IWW8 467 aa26.92■■□□□ 1.9
HERPUD2-205ENST00000427455 FBXL13Q8NEE6 735 aa26.92■■□□□ 1.9
HERPUD2-205ENST00000427455 UHRF1Q96T88 793 aaPredicted RBP26.92■■□□□ 1.9
HERPUD2-205ENST00000427455 MRPL45Q9BRJ2 306 aaKnown RBP26.92■■□□□ 1.9
HERPUD2-205ENST00000427455 PIDD1Q9HB75 910 aa26.92■■□□□ 1.9
HERPUD2-205ENST00000427455 LRG1P02750 347 aa26.91■■□□□ 1.9
HERPUD2-205ENST00000427455 CCDC192P0DO97 292 aa26.91■■□□□ 1.9
HERPUD2-205ENST00000427455 ACAT1P24752 427 aaKnown RBP26.91■■□□□ 1.9
HERPUD2-205ENST00000427455 NOP14P78316 857 aaKnown RBP26.91■■□□□ 1.9
HERPUD2-205ENST00000427455 ZP2Q05996 745 aa26.91■■□□□ 1.9
HERPUD2-205ENST00000427455 TPD52L1Q16890 204 aaPredicted RBP26.91■■□□□ 1.9
HERPUD2-205ENST00000427455 SCARA5Q6ZMJ2 495 aa26.91■■□□□ 1.9
HERPUD2-205ENST00000427455 TRIM59Q8IWR1 403 aa26.91■■□□□ 1.9
HERPUD2-205ENST00000427455 C2orf15Q8WU43 125 aaKnown RBP26.91■■□□□ 1.9
HERPUD2-205ENST00000427455 SNX25Q9H3E2 840 aa26.91■■□□□ 1.9
HERPUD2-205ENST00000427455 SMYD3Q9H7B4 428 aa26.91■■□□□ 1.9
HERPUD2-205ENST00000427455 HSFX1Q9UBD0 423 aa26.91■■□□□ 1.9
HERPUD2-205ENST00000427455 CCL16O15467 120 aa26.9■■□□□ 1.9
HERPUD2-205ENST00000427455 DUSP4Q13115 394 aa26.9■■□□□ 1.9
HERPUD2-205ENST00000427455 NFE2Q16621 373 aaPredicted RBP26.9■■□□□ 1.9
HERPUD2-205ENST00000427455 SPOPLQ6IQ16 392 aa26.9■■□□□ 1.9
HERPUD2-205ENST00000427455 CAVIN1Q6NZI2 390 aaKnown RBP26.9■■□□□ 1.9
HERPUD2-205ENST00000427455 LRRTM3Q86VH5 581 aa26.9■■□□□ 1.9
HERPUD2-205ENST00000427455 ATAD1Q8NBU5 361 aa26.9■■□□□ 1.9
HERPUD2-205ENST00000427455 ELMO3Q96BJ8 720 aa26.9■■□□□ 1.9
HERPUD2-205ENST00000427455 PI4K2AQ9BTU6 479 aa26.9■■□□□ 1.9
HERPUD2-205ENST00000427455 RAB20Q9NX57 234 aa26.9■■□□□ 1.9
HERPUD2-205ENST00000427455 CDH9Q9ULB4 789 aa26.9■■□□□ 1.9
HERPUD2-205ENST00000427455 YIPF1Q9Y548 306 aa26.9■■□□□ 1.9
HERPUD2-205ENST00000427455 HCRTO43612 131 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 N4BP1O75113 896 aaKnown RBP26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 ASPAP45381 313 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 FMO5P49326 533 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 STX1AQ16623 288 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 KLHL40Q2TBA0 621 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 OR6B3Q8NGW1 331 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 SPPL2BQ8TCT7 592 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 CNOT6LQ96LI5 555 aaKnown RBP26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 PKMYT1Q99640 499 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 SYT15Q9BQS2 421 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 NIF3L1Q9GZT8 377 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 CRISPLD1Q9H336 500 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 WDR6Q9NNW5 1121 aaKnown RBP26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 ANO10Q9NW15 660 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 COQ4Q9Y3A0 265 aa26.89■■□□□ 1.9
HERPUD2-205ENST00000427455 NCOR1O75376 2440 aa26.89■■□□□ 1.89
HERPUD2-205ENST00000427455 CLUHO75153 1309 aa26.89■■□□□ 1.89
HERPUD2-205ENST00000427455 LMO2P25791 158 aa26.88■■□□□ 1.89
HERPUD2-205ENST00000427455 GNL1P36915 607 aaPredicted RBP26.88■■□□□ 1.89
HERPUD2-205ENST00000427455 RAP1GAPP47736 663 aa26.88■■□□□ 1.89
HERPUD2-205ENST00000427455 PLD1Q13393 1074 aa26.88■■□□□ 1.89
HERPUD2-205ENST00000427455 SEMA4DQ92854 862 aa26.88■■□□□ 1.89
HERPUD2-205ENST00000427455 NECAB3Q96P71 396 aaPredicted RBP26.88■■□□□ 1.89
HERPUD2-205ENST00000427455 THAP9Q9H5L6 903 aa26.88■■□□□ 1.89
HERPUD2-205ENST00000427455 APOBEC3GQ9HC16 384 aaKnown RBP26.88■■□□□ 1.89
HERPUD2-205ENST00000427455 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.88■■□□□ 1.89
HERPUD2-205ENST00000427455 PCDHB5Q9Y5E4 795 aa26.88■■□□□ 1.89
HERPUD2-205ENST00000427455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.88■■□□□ 1.89
HERPUD2-205ENST00000427455 PMM2O15305 246 aa26.87■■□□□ 1.89
HERPUD2-205ENST00000427455 TWF1Q12792 350 aa26.87■■□□□ 1.89
HERPUD2-205ENST00000427455 TTC9BQ8N6N2 239 aa26.87■■□□□ 1.89
HERPUD2-205ENST00000427455 FAXDC2Q96IV6 333 aa26.87■■□□□ 1.89
HERPUD2-205ENST00000427455 BCO2Q9BYV7 579 aa26.87■■□□□ 1.89
HERPUD2-205ENST00000427455 TMLHEQ9NVH6 421 aa26.87■■□□□ 1.89
HERPUD2-205ENST00000427455 ABI2Q9NYB9 513 aaPredicted RBP26.87■■□□□ 1.89
HERPUD2-205ENST00000427455 BDP1A6H8Y1 2624 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 P4HA2O15460 535 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 PDGFRBP09619 1106 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 TUFMP49411 452 aaKnown RBP26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 CDH8P55286 799 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 PSMC1P62191 440 aaKnown RBP26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 MAPRE1Q15691 268 aaKnown RBP26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 WDR44Q5JSH3 913 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 FAM171BQ6P995 826 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 GRASPQ7Z6J2 395 aaPredicted RBP26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 FAM114A1Q8IWE2 563 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 ELMOD1Q8N336 334 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 SDCBP2Q9H190 292 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 ABCB6Q9NP58 842 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 GTF3C4Q9UKN8 822 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 SLC27A5Q9Y2P5 690 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 NR2E1Q9Y466 385 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 NME7Q9Y5B8 376 aa26.86■■□□□ 1.89
HERPUD2-205ENST00000427455 MYBPHLA2RUH7 354 aa26.85■■□□□ 1.89
HERPUD2-205ENST00000427455 C19orf67A6NJJ6 358 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms