RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 PIAS3Q9Y6X2 628 aa16.28■□□□□ 0.2
RARA-205ENST00000420042 COL4A3Q01955 1670 aa16.27■□□□□ 0.2
RARA-205ENST00000420042 ZNF233A6NK53 670 aa16.27■□□□□ 0.2
RARA-205ENST00000420042 HAPLN1P10915 354 aaPredicted RBP16.27■□□□□ 0.2
RARA-205ENST00000420042 ATF6P18850 670 aa16.27■□□□□ 0.2
RARA-205ENST00000420042 CDC25CP30307 473 aa16.27■□□□□ 0.2
RARA-205ENST00000420042 RBP5P82980 135 aa16.27■□□□□ 0.2
RARA-205ENST00000420042 ZNF528Q3MIS6 628 aa16.27■□□□□ 0.2
RARA-205ENST00000420042 FOXD4L6Q3SYB3 417 aaPredicted RBP16.27■□□□□ 0.2
RARA-205ENST00000420042 FOXD4L3Q6VB84 417 aaPredicted RBP16.27■□□□□ 0.2
RARA-205ENST00000420042 GPIHBP1Q8IV16 184 aa16.27■□□□□ 0.2
RARA-205ENST00000420042 MAML2Q8IZL2 1156 aaPredicted RBP16.27■□□□□ 0.2
RARA-205ENST00000420042 PDCL2Q8N4E4 241 aa16.27■□□□□ 0.2
RARA-205ENST00000420042 GIPC2Q8TF65 315 aa16.27■□□□□ 0.2
RARA-205ENST00000420042 HPS3Q969F9 1004 aa16.27■□□□□ 0.2
RARA-205ENST00000420042 ANKRD36BP1Q96IX9 119 aa16.27■□□□□ 0.2
RARA-205ENST00000420042 PCDHB5Q9Y5E4 795 aa16.27■□□□□ 0.2
RARA-205ENST00000420042 ZFHX2Q9C0A1 2572 aaPredicted RBP16.27■□□□□ 0.19
RARA-205ENST00000420042 CHADO15335 359 aa16.26■□□□□ 0.19
RARA-205ENST00000420042 ZSCAN22P10073 491 aaPredicted RBP16.26■□□□□ 0.19
RARA-205ENST00000420042 KPNA1P52294 538 aaPredicted RBP16.26■□□□□ 0.19
RARA-205ENST00000420042 MYL7Q01449 175 aa16.26■□□□□ 0.19
RARA-205ENST00000420042 SURF1Q15526 300 aa16.26■□□□□ 0.19
RARA-205ENST00000420042 NFE2Q16621 373 aaPredicted RBP16.26■□□□□ 0.19
RARA-205ENST00000420042 SHC4Q6S5L8 630 aa16.26■□□□□ 0.19
RARA-205ENST00000420042 TMEM86AQ8N2M4 240 aa16.26■□□□□ 0.19
RARA-205ENST00000420042 GLIS3Q8NEA6 775 aa16.26■□□□□ 0.19
RARA-205ENST00000420042 ACBD6Q9BR61 282 aa16.26■□□□□ 0.19
RARA-205ENST00000420042 MTMR12Q9C0I1 747 aa16.26■□□□□ 0.19
RARA-205ENST00000420042 TASP1Q9H6P5 420 aa16.26■□□□□ 0.19
RARA-205ENST00000420042 MAGEF1Q9HAY2 307 aa16.26■□□□□ 0.19
RARA-205ENST00000420042 DDX43Q9NXZ2 648 aaKnown RBP16.26■□□□□ 0.19
RARA-205ENST00000420042 FAM13BQ9NYF5 915 aa16.26■□□□□ 0.19
RARA-205ENST00000420042 SNX9Q9Y5X1 595 aa16.26■□□□□ 0.19
RARA-205ENST00000420042 SHISA7A6NL88 538 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 EIF3DO15371 548 aaKnown RBP eCLIP16.25■□□□□ 0.19
RARA-205ENST00000420042 KINO60870 393 aaKnown RBP16.25■□□□□ 0.19
RARA-205ENST00000420042 PRPF40AO75400 957 aaKnown RBP16.25■□□□□ 0.19
RARA-205ENST00000420042 F13A1P00488 732 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 TNNC2P02585 160 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 ME1P48163 572 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 CYP4F8P98187 520 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 FCHO2Q0JRZ9 810 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 MYO1EQ12965 1108 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 ATRIPQ8WXE1 791 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 RSPRY1Q96DX4 576 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 HINFPQ9BQA5 517 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 PI4K2AQ9BTU6 479 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 MKNK1Q9BUB5 465 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 KIAA1586Q9HCI6 787 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 TMLHEQ9NVH6 421 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 GDAP2Q9NXN4 497 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 OBP2AQ9NY56 170 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 HSPBP1Q9NZL4 362 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 L1RE1Q9UN81 338 aa16.25■□□□□ 0.19
RARA-205ENST00000420042 NCANO14594 1321 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 ARNTLO00327 626 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 POLR2DO15514 142 aaKnown RBP16.24■□□□□ 0.19
RARA-205ENST00000420042 CCNE1P24864 410 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 WEE1P30291 646 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 LHX1P48742 406 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 MLLT6P55198 1093 aaPredicted RBP16.24■□□□□ 0.19
RARA-205ENST00000420042 RPL10AP62906 217 aaKnown RBP16.24■□□□□ 0.19
RARA-205ENST00000420042 MTAPQ13126 283 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 FZD5Q13467 585 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 DUOXA2Q1HG44 320 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 ARHGAP29Q52LW3 1261 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 FAM26FQ5R3K3 315 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 LMBRD2Q68DH5 695 aaPredicted RBP16.24■□□□□ 0.19
RARA-205ENST00000420042 ATL3Q6DD88 541 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 CNNM4Q6P4Q7 775 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 C1orf228Q6PIY5 440 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 CBWD2Q8IUF1 395 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 ADGRF2Q8IZF7 708 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 TOP6BLQ8N6T0 577 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 CXorf38Q8TB03 319 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 SPATA18Q8TC71 538 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 ZNF507Q8TCN5 953 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 MSANTD3Q96H12 275 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 FAM84AQ96KN4 292 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 C7orf25Q9BPX7 421 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 C8orf33Q9H7E9 229 aaPredicted RBP16.24■□□□□ 0.19
RARA-205ENST00000420042 LMAN1LQ9HAT1 526 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 IL21Q9HBE4 155 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 INTS13Q9NVM9 706 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 THG1LQ9NWX6 298 aaKnown RBP16.24■□□□□ 0.19
RARA-205ENST00000420042 ZMYM5Q9UJ78 669 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 CFAP45Q9UL16 551 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 PCDHGA2Q9Y5H1 932 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 ANK1P16157 1881 aa16.24■□□□□ 0.19
RARA-205ENST00000420042 SCN1AP35498 2009 aa16.23■□□□□ 0.19
RARA-205ENST00000420042 SLC38A8A6NNN8 435 aa16.23■□□□□ 0.19
RARA-205ENST00000420042 CSH1P0DML2 217 aa16.23■□□□□ 0.19
RARA-205ENST00000420042 CSH2P0DML3 217 aa16.23■□□□□ 0.19
RARA-205ENST00000420042 ACAT1P24752 427 aaKnown RBP16.23■□□□□ 0.19
RARA-205ENST00000420042 PCSK1P29120 753 aa16.23■□□□□ 0.19
RARA-205ENST00000420042 AVPR1AP37288 418 aa16.23■□□□□ 0.19
RARA-205ENST00000420042 PPP2R5DQ14738 602 aa16.23■□□□□ 0.19
RARA-205ENST00000420042 INTS6LQ5JSJ4 861 aaKnown RBP16.23■□□□□ 0.19
RARA-205ENST00000420042 SCARA3Q6AZY7 606 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms