RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 GYS2P54840 703 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 POU4F1Q01851 419 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 TRIM65Q6PJ69 517 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 VPS37AQ8NEZ2 397 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 CYGBQ8WWM9 190 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 PNKPQ96T60 521 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 MYCBPQ99417 103 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-205ENST00000418258 TRABDQ9H4I3 376 aa11.7□□□□□ -0.54
PTCH1-205ENST00000418258 PMPCBO75439 489 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 HLA-DRAP01903 254 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 ALOX15P16050 662 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 OSBPL10Q9BXB5 764 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 ANO9A1A5B4 782 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 FAM47E-STBD1D6RA91 191 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 AKAP10O43572 662 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 KRT78Q8N1N4 520 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 MTA3Q9BTC8 594 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 WWP1Q9H0M0 922 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 NEU2Q9Y3R4 380 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 TEX33O43247 280 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 ADCY3O60266 1144 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 SLC2A3P11169 496 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 PMS1P54277 932 aaKnown RBP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 MRPL28Q13084 256 aaKnown RBP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 BFSP2Q13515 415 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 BYSLQ13895 437 aaKnown RBP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 C3orf62Q6ZUJ4 267 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 PCYOX1LQ8NBM8 494 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 BLOC1S5Q8TDH9 187 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 ZMAT2Q96NC0 199 aaKnown RBP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 GOLPH3Q9H4A6 298 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 WWOXQ9NZC7 414 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 SERPINB10P48595 397 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 TNIP2Q8NFZ5 429 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 IL1RL2Q9HB29 575 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 CDC16Q13042 620 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 CAMK2GQ13555 558 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 HASPINQ8TF76 798 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 KCNH7Q9NS40 1196 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 LIMA1Q9UHB6 759 aaKnown RBP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 TULP4Q9NRJ4 1543 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 CAMSAP1Q5T5Y3 1602 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 AP1G2O75843 785 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 BRD2P25440 801 aaKnown RBP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 EZH2Q15910 746 aaKnown RBP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 TTLL9Q3SXZ7 439 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 C9orf131Q5VYM1 1079 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 SGMS1Q86VZ5 419 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 TSC22D3Q99576 134 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 COPS7BQ9H9Q2 264 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 STARD7Q9NQZ5 370 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 MARCOQ9UEW3 520 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 TRMT6Q9UJA5 497 aaKnown RBP11.69□□□□□ -0.54
PTCH1-205ENST00000418258 FBXL21Q9UKT6 434 aa11.69□□□□□ -0.54
PTCH1-205ENST00000418258 IQSEC2Q5JU85 1478 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 RASSF10A6NK89 507 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 EVPLLA8MZ36 301 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 VTNP04004 478 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 CCDC159P0C7I6 412 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 EPHB3P54753 998 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 ANGPT1Q15389 498 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 IFNEQ86WN2 208 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 TEX9Q8N6V9 391 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 NMRK1Q9NWW6 199 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 WDR47O94967 919 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 FAM107AO95990 144 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 HPGDP15428 266 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 EPHB2P29323 1055 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 TTC39BQ5VTQ0 682 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 TRIM9Q9C026 710 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 ETNK1Q9HBU6 452 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 ADARB2Q9NS39 739 aaKnown RBP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 UVRAGQ9P2Y5 699 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 PRR23D1E9PI22 279 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 M0QYT0 321 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 EIF3DO15371 548 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 FOXP2O15409 715 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 PHF2O75151 1096 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 PRR23D2P0DMB1 279 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 RABGAP1LQ5R372 815 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 SHC4Q6S5L8 630 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 LINC00523Q86TU6 105 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 CPB2Q96IY4 423 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 DDIT4Q9NX09 232 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 EGFRP00533 1210 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 CHI3L1P36222 383 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 CCDC142Q17RM4 750 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 PLEKHH3Q7Z736 793 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 CATSPER1Q8NEC5 780 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 PRPF18Q99633 342 aaKnown RBP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 PLA2G4CQ9UP65 541 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 CHGBP05060 677 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 PNMA6AP0CW24 399 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 SPRP35270 261 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 PGM1P36871 562 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 ATXN3P54252 364 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 PPP1R14AQ96A00 147 aa11.68□□□□□ -0.54
PTCH1-205ENST00000418258 RPRD1AQ96P16 312 aaPredicted RBP11.68□□□□□ -0.54
PTCH1-205ENST00000418258 SMAD5Q99717 465 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms