RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 TTLL13PA6NNM8 815 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 HAUS5O94927 633 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 ARHGAP15Q53QZ3 475 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 TRIML2Q8N7C3 387 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 TFB1MQ8WVM0 346 aaKnown RBP11.1□□□□□ -0.63
COL12A1-203ENST00000416123 THAP2Q9H0W7 228 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 CAPN10Q9HC96 672 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 POLE2P56282 527 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 CARNMT1Q8N4J0 409 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 ATP6V1G3Q96LB4 118 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 CENPKQ9BS16 269 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 CINPQ9BW66 212 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-203ENST00000416123 GLIS2Q9BZE0 524 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-203ENST00000416123 OSBPL8Q9BZF1 889 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 THEGQ9P2T0 379 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 UVRAGQ9P2Y5 699 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 PON1P27169 355 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 VSNL1P62760 191 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 STILQ15468 1287 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 KCNT1Q5JUK3 1230 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 CBWD2Q8IUF1 395 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 GPRASP2Q96D09 838 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 ASPSCR1Q9BZE9 553 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 NEUROG2Q9H2A3 272 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 PCDHGB4Q9UN71 923 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 MCF2P10911 925 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 ZNF200P98182 395 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-203ENST00000416123 CXCL9Q07325 125 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 DNAJB3Q8WWF6 145 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 CBWD1Q9BRT8 395 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 STAG3L1P0CL83 205 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 AKAP5P24588 427 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 TROAPQ12815 778 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 KLHDC7AQ5VTJ3 777 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 PKN3Q6P5Z2 889 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 KAT2BQ92831 832 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 MAP3K14Q99558 947 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 RUBCNLQ9H714 662 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 USP20Q9Y2K6 914 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 TMEM150BA6NC51 233 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 SPTLC1O15269 473 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 LMNAP02545 664 aaKnown RBP11.1□□□□□ -0.63
COL12A1-203ENST00000416123 ACO1P21399 889 aaKnown RBP11.1□□□□□ -0.63
COL12A1-203ENST00000416123 PBLDP30039 288 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-203ENST00000416123 ADGRF2Q8IZF7 708 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 TEKT2Q9UIF3 430 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 RNF103-CHMP3A0A140T963 221 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 HIST1H2AGP0C0S8 130 aaPredicted RBP11.1□□□□□ -0.63
COL12A1-203ENST00000416123 SKIP12755 728 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 HIST1H2ADP20671 130 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 EPHB2P29323 1055 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 SHCBP1Q8NEM2 672 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 HIST1H2AHQ96KK5 128 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 HIST1H2AJQ99878 128 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 H2AFJQ9BTM1 129 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 RNF19AQ9NV58 838 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 EFHC1Q5JVL4 640 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 DENND5BQ6ZUT9 1274 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 SLC47A2Q86VL8 602 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 NLRP14Q86W24 1093 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 DNAAF5Q86Y56 855 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 FBXO32Q969P5 355 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 COLEC11Q9BWP8 271 aa11.1□□□□□ -0.63
COL12A1-203ENST00000416123 CYP11B2P19099 503 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 NPTX2P47972 431 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 DMTNQ08495 405 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 SEMA3FQ13275 785 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 KLF6Q99612 283 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-203ENST00000416123 STARD7Q9NQZ5 370 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 TIMM13Q9Y5L4 95 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-203ENST00000416123 RAD51CO43502 376 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 HSP90AA5PQ58FG0 334 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 ACAD10Q6JQN1 1059 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 SLC16A10Q8TF71 515 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 SPIRE2Q8WWL2 714 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 SPATC1LQ9H0A9 340 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 IL1RL2Q9HB29 575 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 SNTG2Q9NY99 539 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL12A1-203ENST00000416123 LTN1O94822 1766 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 DCDC2CA8MYV0 355 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 PSMD3O43242 534 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 CYP2C8P10632 490 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 CHRM3P20309 590 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 DDX42Q86XP3 938 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL12A1-203ENST00000416123 ITIH6Q6UXX5 1313 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 SEC24DO94855 1032 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-203ENST00000416123 CD44P16070 742 aaKnown RBP11.09□□□□□ -0.63
COL12A1-203ENST00000416123 PTK7Q13308 1070 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 E4F1Q66K89 784 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-203ENST00000416123 BLOC1S5Q8TDH9 187 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 COG1Q8WTW3 980 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 A0A087WZ62 844 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 MBL2P11226 248 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-203ENST00000416123 BTKQ06187 659 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 FDXACB1Q9BRP7 624 aaPredicted RBP11.09□□□□□ -0.63
COL12A1-203ENST00000416123 SHCBP1LQ9BZQ2 653 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 ZNF263O14978 683 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 ARIH2O95376 493 aa11.09□□□□□ -0.63
COL12A1-203ENST00000416123 MYL2P10916 166 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms