RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SLC5A1P13866 664 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 MCM7P33993 719 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 MC2RQ01718 297 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 TP53BP2Q13625 1128 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 IGFL4Q6B9Z1 124 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 MICALCLQ6ZW33 695 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 GPR149Q86SP6 731 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 Q8N1X5 172 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 PCSK9Q8NBP7 692 aaKnown RBP4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 NSUN7Q8NE18 718 aaKnown RBP4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 FAM46DQ8NEK8 389 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 PHKBQ93100 1093 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 TRIM43Q96BQ3 446 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 OSBPL9Q96SU4 736 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 ZNF518BQ9C0D4 1074 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 SERHL2Q9H4I8 314 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 MMRN2Q9H8L6 949 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 XPR1Q9UBH6 696 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 CPNE7Q9UBL6 633 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 TMX2Q9Y320 296 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 REXO2Q9Y3B8 237 aaKnown RBP4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 PCDHGB6Q9Y5F9 930 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 TOR1BO14657 336 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 DCLK1O15075 740 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 TBC1D4O60343 1298 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 ATXN1LP0C7T5 689 aaKnown RBP4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 SRGNP10124 158 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 BRAFP15056 766 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 UCP3P55916 312 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 TAP1Q03518 808 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 FPGSQ05932 587 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 ABHD18Q0P651 414 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 SLC13A2Q13183 592 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 CTBP1Q13363 440 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 RAB32Q13637 225 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 BOP1Q14137 746 aaKnown RBP4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 LONRF3Q496Y0 759 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 SLC44A4Q53GD3 710 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 KSR2Q6VAB6 950 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 MICU3Q86XE3 530 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 CCAR1Q8IX12 1150 aaKnown RBP4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 ULK2Q8IYT8 1036 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 LNX2Q8N448 690 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 DNAJC5GQ8N7S2 189 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 ASB10Q8WXI3 467 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 SNX19Q92543 992 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 ZC3H10Q96K80 434 aaKnown RBP4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 UNKQ9C0B0 810 aaKnown RBP4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 ZNF287Q9HBT7 754 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 INTS13Q9NVM9 706 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 ANKFY1Q9P2R3 1169 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 OGDHLQ9ULD0 1010 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 RAD54BQ9Y620 910 aa4.72□□□□□ -1.65
HMGB1P11-201ENST00000413899 TRGV11A0A075B6L2 103 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 MBD3L4A6NDZ8 208 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 MBD3L3A6NE82 208 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 UNC119BA6NIH7 251 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 PMM2O15305 246 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 PROM1O43490 865 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 PQBP1O60828 265 aaKnown RBP4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 FZD7O75084 574 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 VPS4BO75351 444 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 XRCC6P12956 609 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 C6P13671 934 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 ITGALP20701 1170 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 TGM1P22735 817 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 ZEB1P37275 1124 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 NPTX2P47972 431 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 GCLCP48506 637 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 IQCB1Q15051 598 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 PTPAQ15257 358 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 MAP9Q49MG5 647 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 SESTD1Q86VW0 696 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 GAS2L3Q86XJ1 694 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 CCDC146Q8IYE0 955 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 FAM9AQ8IZU1 332 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 FAM109AQ8N4B1 249 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 AMER2Q8N7J2 671 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 TMEM125Q96AQ2 219 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 COQ10AQ96MF6 247 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 SLC46A1Q96NT5 459 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 STRBPQ96SI9 672 aaKnown RBP4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 MESP1Q9BRJ9 268 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 WDR11Q9BZH6 1224 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 ZNF700Q9H0M5 742 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 SMOC2Q9H3U7 446 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 A1CFQ9NQ94 594 aaKnown RBP4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 TBCCD1Q9NVR7 557 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 COL20A1Q9P218 1284 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 FAM50BQ9Y247 325 aa4.71□□□□□ -1.66
HMGB1P11-201ENST00000413899 CCDC194A0A1B0GVG4 234 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 MYO1CO00159 1063 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 TRIAP1O43715 76 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 MAP4K4O95819 1239 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 ADH4P08319 380 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 GATA3P23771 443 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 KLRC1P26715 233 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 ACVRL1P37023 503 aa4.7□□□□□ -1.66
HMGB1P11-201ENST00000413899 TM4SF4P48230 202 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms