RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 CDR1P51861 262 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 TNNC1P63316 161 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 FKBP3Q00688 224 aaKnown RBP10.8□□□□□ -0.68
TMEM248-202ENST00000413593 MYL7Q01449 175 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 TSPY1Q01534 308 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 TWF1Q12792 350 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 SMARCB1Q12824 385 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 NCOA4Q13772 614 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 PTPN21Q16825 1174 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 INTS6LQ5JSJ4 861 aaKnown RBP10.8□□□□□ -0.68
TMEM248-202ENST00000413593 SV2AQ7L0J3 742 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 C2orf15Q8WU43 125 aaKnown RBP10.8□□□□□ -0.68
TMEM248-202ENST00000413593 SYAP1Q96A49 352 aaPredicted RBP10.8□□□□□ -0.68
TMEM248-202ENST00000413593 MMS19Q96T76 1030 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 PKMYT1Q99640 499 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 VRTNQ9H8Y1 702 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 AVENQ9NQS1 362 aaPredicted RBP10.8□□□□□ -0.68
TMEM248-202ENST00000413593 LMBRD1Q9NUN5 540 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 TMLHEQ9NVH6 421 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.8□□□□□ -0.68
TMEM248-202ENST00000413593 KIAA1468Q9P260 1216 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 EPS15L1Q9UBC2 864 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 LIMD1Q9UGP4 676 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 SLC27A5Q9Y2P5 690 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 SCN1AP35498 2009 aa10.8□□□□□ -0.68
TMEM248-202ENST00000413593 MUC3AQ02505 3323 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 SLC16A3O15427 465 aaKnown RBP10.79□□□□□ -0.68
TMEM248-202ENST00000413593 TACC1O75410 805 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 ASGR2P07307 311 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 FAM163BP0C2L3 166 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 EPB41P11171 864 aaKnown RBP10.79□□□□□ -0.68
TMEM248-202ENST00000413593 LAMP2P13473 410 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 GCLMP48507 274 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 PPP3CAQ08209 521 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 PLD1Q13393 1074 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 NFE2Q16621 373 aaPredicted RBP10.79□□□□□ -0.68
TMEM248-202ENST00000413593 CCDC142Q17RM4 750 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 SLC5A9Q2M3M2 681 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 ZNF699Q32M78 642 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 ZNF667Q5HYK9 610 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 IQCEQ6IPM2 695 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 KLHL10Q6JEL2 608 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 FOXR2Q6PJQ5 311 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 ELMOD1Q8N336 334 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 TRIML1Q8N9V2 468 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 ITFG1Q8TB96 612 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 SPPL2BQ8TCT7 592 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 ZNF512Q96ME7 567 aaPredicted RBP10.79□□□□□ -0.68
TMEM248-202ENST00000413593 GBP4Q96PP9 640 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 CORO1BQ9BR76 489 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 MRPL45Q9BRJ2 306 aaKnown RBP10.79□□□□□ -0.68
TMEM248-202ENST00000413593 DNAJC25Q9H1X3 360 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 CLSTN2Q9H4D0 955 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 NXF1Q9UBU9 619 aaKnown RBP10.79□□□□□ -0.68
TMEM248-202ENST00000413593 MRPS23Q9Y3D9 190 aaKnown RBP10.79□□□□□ -0.68
TMEM248-202ENST00000413593 PCDHB5Q9Y5E4 795 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 ZFP37Q9Y6Q3 630 aaPredicted RBP10.79□□□□□ -0.68
TMEM248-202ENST00000413593 TSC2P49815 1807 aa10.79□□□□□ -0.68
TMEM248-202ENST00000413593 SOAT2O75908 522 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 ASS1P00966 412 aaKnown RBP10.78□□□□□ -0.68
TMEM248-202ENST00000413593 HLA-DRAP01903 254 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 HAPLN1P10915 354 aaPredicted RBP10.78□□□□□ -0.68
TMEM248-202ENST00000413593 ATF6P18850 670 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 LMO2P25791 158 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 GTF2H1P32780 548 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 ALDH1A3P47895 512 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 TUFMP49411 452 aaKnown RBP10.78□□□□□ -0.68
TMEM248-202ENST00000413593 EPHB3P54753 998 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 EPHA5P54756 1037 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 ZXDAP98168 799 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 SGSM1Q2NKQ1 1148 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 MGAT5BQ3V5L5 792 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 PRSS36Q5K4E3 855 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 TTI2Q6NXR4 508 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 FAM171BQ6P995 826 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 NPAS3Q8IXF0 933 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 HS6ST3Q8IZP7 471 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 LEMD2Q8NC56 503 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 TAS1R2Q8TE23 839 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 NELFBQ8WX92 580 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 TAF4BQ92750 862 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 EDAQ92838 391 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 FGF13Q92913 245 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 ELMO3Q96BJ8 720 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 CEP63Q96MT8 703 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 SEPT5Q99719 369 aaPredicted RBP10.78□□□□□ -0.68
TMEM248-202ENST00000413593 DUSP9Q99956 384 aaKnown RBP10.78□□□□□ -0.68
TMEM248-202ENST00000413593 SYT15Q9BQS2 421 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 C1QTNF1Q9BXJ1 281 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 LRRC3Q9BY71 257 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 SMYD3Q9H7B4 428 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 KCNK12Q9HB15 430 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 TMEM8AQ9HCN3 771 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 C11orf16Q9NQ32 467 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 CRTAC1Q9NQ79 661 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 ABI2Q9NYB9 513 aaPredicted RBP10.78□□□□□ -0.68
TMEM248-202ENST00000413593 IGSF9Q9P2J2 1179 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 GTF3C4Q9UKN8 822 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 CDH9Q9ULB4 789 aa10.78□□□□□ -0.68
TMEM248-202ENST00000413593 CDH7Q9ULB5 785 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms