RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 GPR158Q5T848 1215 aa24.04■■□□□ 1.44
MSH6-202ENST00000411819 GPIHBP1Q8IV16 184 aa24.04■■□□□ 1.44
MSH6-202ENST00000411819 MFSD6LQ8IWD5 586 aa24.04■■□□□ 1.44
MSH6-202ENST00000411819 C2orf15Q8WU43 125 aaKnown RBP24.04■■□□□ 1.44
MSH6-202ENST00000411819 E2F7Q96AV8 911 aa24.04■■□□□ 1.44
MSH6-202ENST00000411819 MTMR12Q9C0I1 747 aa24.04■■□□□ 1.44
MSH6-202ENST00000411819 KBTBD4Q9NVX7 518 aa24.04■■□□□ 1.44
MSH6-202ENST00000411819 ITGA11Q9UKX5 1188 aa24.04■■□□□ 1.44
MSH6-202ENST00000411819 PIAS3Q9Y6X2 628 aa24.04■■□□□ 1.44
MSH6-202ENST00000411819 FANCMQ8IYD8 2048 aa24.04■■□□□ 1.44
MSH6-202ENST00000411819 MAN2B1O00754 1011 aa24.03■■□□□ 1.44
MSH6-202ENST00000411819 DPYSL4O14531 572 aa24.03■■□□□ 1.44
MSH6-202ENST00000411819 HUS1O60921 280 aa24.03■■□□□ 1.44
MSH6-202ENST00000411819 LMNAP02545 664 aaKnown RBP24.03■■□□□ 1.44
MSH6-202ENST00000411819 CYP4F8P98187 520 aa24.03■■□□□ 1.44
MSH6-202ENST00000411819 LMBRD2Q68DH5 695 aaPredicted RBP24.03■■□□□ 1.44
MSH6-202ENST00000411819 SHC4Q6S5L8 630 aa24.03■■□□□ 1.44
MSH6-202ENST00000411819 LRRTM3Q86VH5 581 aa24.03■■□□□ 1.44
MSH6-202ENST00000411819 CSGALNACT2Q8N6G5 542 aa24.03■■□□□ 1.44
MSH6-202ENST00000411819 IQUBQ8NA54 791 aa24.03■■□□□ 1.44
MSH6-202ENST00000411819 GIPC2Q8TF65 315 aa24.03■■□□□ 1.44
MSH6-202ENST00000411819 L1RE1Q9UN81 338 aa24.03■■□□□ 1.44
MSH6-202ENST00000411819 F13A1P00488 732 aa24.02■■□□□ 1.44
MSH6-202ENST00000411819 ZSCAN22P10073 491 aaPredicted RBP24.02■■□□□ 1.44
MSH6-202ENST00000411819 ARID3BQ8IVW6 561 aaPredicted RBP24.02■■□□□ 1.44
MSH6-202ENST00000411819 MAML2Q8IZL2 1156 aaPredicted RBP24.02■■□□□ 1.44
MSH6-202ENST00000411819 PDCL2Q8N4E4 241 aa24.02■■□□□ 1.44
MSH6-202ENST00000411819 LRRC52Q8N7C0 313 aa24.02■■□□□ 1.44
MSH6-202ENST00000411819 CSGALNACT1Q8TDX6 532 aa24.02■■□□□ 1.44
MSH6-202ENST00000411819 RSPRY1Q96DX4 576 aa24.02■■□□□ 1.44
MSH6-202ENST00000411819 ANKRD36BP1Q96IX9 119 aa24.02■■□□□ 1.44
MSH6-202ENST00000411819 SEMA4AQ9H3S1 761 aa24.02■■□□□ 1.44
MSH6-202ENST00000411819 R3HCC1Q9Y3T6 440 aaKnown RBP24.02■■□□□ 1.44
MSH6-202ENST00000411819 PCDHB5Q9Y5E4 795 aa24.02■■□□□ 1.44
MSH6-202ENST00000411819 F5P12259 2224 aa24.02■■□□□ 1.44
MSH6-202ENST00000411819 KIAA0391O15091 583 aaKnown RBP24.01■■□□□ 1.43
MSH6-202ENST00000411819 HAPLN1P10915 354 aaPredicted RBP24.01■■□□□ 1.43
MSH6-202ENST00000411819 CDC25CP30307 473 aa24.01■■□□□ 1.43
MSH6-202ENST00000411819 CSTF1Q05048 431 aaKnown RBP24.01■■□□□ 1.43
MSH6-202ENST00000411819 FAM3CQ92520 227 aa24.01■■□□□ 1.43
MSH6-202ENST00000411819 CLDN23Q96B33 292 aa24.01■■□□□ 1.43
MSH6-202ENST00000411819 MKNK1Q9BUB5 465 aa24.01■■□□□ 1.43
MSH6-202ENST00000411819 TRPV5Q9NQA5 729 aa24.01■■□□□ 1.43
MSH6-202ENST00000411819 FBXO4Q9UKT5 387 aa24.01■■□□□ 1.43
MSH6-202ENST00000411819 SNX9Q9Y5X1 595 aa24.01■■□□□ 1.43
MSH6-202ENST00000411819 SHISA7A6NL88 538 aa24■■□□□ 1.43
MSH6-202ENST00000411819 ACAT1P24752 427 aaKnown RBP24■■□□□ 1.43
MSH6-202ENST00000411819 RPS9P46781 194 aaKnown RBP24■■□□□ 1.43
MSH6-202ENST00000411819 RBP5P82980 135 aa24■■□□□ 1.43
MSH6-202ENST00000411819 MYL7Q01449 175 aa24■■□□□ 1.43
MSH6-202ENST00000411819 FAM26FQ5R3K3 315 aa24■■□□□ 1.43
MSH6-202ENST00000411819 CBWD2Q8IUF1 395 aa24■■□□□ 1.43
MSH6-202ENST00000411819 SPRYD3Q8NCJ5 442 aa24■■□□□ 1.43
MSH6-202ENST00000411819 PI4K2AQ9BTU6 479 aa24■■□□□ 1.43
MSH6-202ENST00000411819 TMLHEQ9NVH6 421 aa24■■□□□ 1.43
MSH6-202ENST00000411819 DDX43Q9NXZ2 648 aaKnown RBP24■■□□□ 1.43
MSH6-202ENST00000411819 HSPBP1Q9NZL4 362 aa24■■□□□ 1.43
MSH6-202ENST00000411819 CFAP54Q96N23 3096 aa24■■□□□ 1.43
MSH6-202ENST00000411819 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.99■■□□□ 1.43
MSH6-202ENST00000411819 ZNF233A6NK53 670 aa23.99■■□□□ 1.43
MSH6-202ENST00000411819 CHADO15335 359 aa23.99■■□□□ 1.43
MSH6-202ENST00000411819 EIF3DO15371 548 aaKnown RBP eCLIP23.99■■□□□ 1.43
MSH6-202ENST00000411819 POLR2DO15514 142 aaKnown RBP23.99■■□□□ 1.43
MSH6-202ENST00000411819 PRPF40AO75400 957 aaKnown RBP23.99■■□□□ 1.43
MSH6-202ENST00000411819 TNNC2P02585 160 aa23.99■■□□□ 1.43
MSH6-202ENST00000411819 PDIA4P13667 645 aaKnown RBP23.99■■□□□ 1.43
MSH6-202ENST00000411819 ME1P48163 572 aa23.99■■□□□ 1.43
MSH6-202ENST00000411819 FCHO2Q0JRZ9 810 aa23.99■■□□□ 1.43
MSH6-202ENST00000411819 NFE2Q16621 373 aaPredicted RBP23.99■■□□□ 1.43
MSH6-202ENST00000411819 SCARA3Q6AZY7 606 aa23.99■■□□□ 1.43
MSH6-202ENST00000411819 ADGRF2Q8IZF7 708 aa23.99■■□□□ 1.43
MSH6-202ENST00000411819 TMEM86AQ8N2M4 240 aa23.99■■□□□ 1.43
MSH6-202ENST00000411819 HINFPQ9BQA5 517 aa23.99■■□□□ 1.43
MSH6-202ENST00000411819 MAGEF1Q9HAY2 307 aa23.99■■□□□ 1.43
MSH6-202ENST00000411819 FAM13BQ9NYF5 915 aa23.99■■□□□ 1.43
MSH6-202ENST00000411819 SIX4Q9UIU6 781 aa23.99■■□□□ 1.43
MSH6-202ENST00000411819 SLC38A8A6NNN8 435 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 KINO60870 393 aaKnown RBP23.98■■□□□ 1.43
MSH6-202ENST00000411819 PRAMEF12O95522 483 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 CCNE1P24864 410 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 GPR15P49685 360 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 KPNA1P52294 538 aaPredicted RBP23.98■■□□□ 1.43
MSH6-202ENST00000411819 SURF1Q15526 300 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 ZNF528Q3MIS6 628 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 STKLD1Q8NE28 680 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 CXorf38Q8TB03 319 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 ACBD6Q9BR61 282 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 BLZF1Q9H2G9 400 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 TASP1Q9H6P5 420 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 IL21Q9HBE4 155 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 INTS13Q9NVM9 706 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 MAGED2Q9UNF1 606 aaPredicted RBP23.98■■□□□ 1.43
MSH6-202ENST00000411819 PTPRJQ12913 1337 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 OBSL1O75147 1896 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 DENND4CQ5VZ89 1909 aa23.98■■□□□ 1.43
MSH6-202ENST00000411819 ARNTLO00327 626 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 CASP1P29466 404 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 HOXD13P35453 343 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 MYO1EQ12965 1108 aa23.97■■□□□ 1.43
MSH6-202ENST00000411819 MTAPQ13126 283 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms