RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 KCNA4P22459 653 aa15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 PXNP49023 591 aaPredicted RBP15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 MCM2P49736 904 aa15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 ACOT2P49753 483 aa15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 PTPAQ15257 358 aa15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 CMTM8Q8IZV2 173 aa15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 THEM5Q8N1Q8 247 aa15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 CALML4Q96GE6 196 aa15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 PYM1Q9BRP8 204 aaKnown RBP15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 ARRDC1-AS1Q9H2J1 176 aa15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 PARVGQ9HBI0 331 aa15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 DERAQ9Y315 318 aa15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 GREB1Q4ZG55 1949 aa15.41■□□□□ 0.06
HLA-DQB2-229ENST00000411527 ANKRD63C9JTQ0 380 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 NMT1P30419 496 aaKnown RBP15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 UBA7P41226 1012 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 ZNF131P52739 623 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 MCM6Q14566 821 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 AASDHQ4L235 1098 aaPredicted RBP15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 ADALQ6DHV7 355 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 IL31Q6EBC2 164 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 PKN3Q6P5Z2 889 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 LRRTM3Q86VH5 581 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 SPPL2BQ8TCT7 592 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 LRRC15Q8TF66 581 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 C2orf15Q8WU43 125 aaKnown RBP15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 CHAMP1Q96JM3 812 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 AK8Q96MA6 479 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 ASB7Q9H672 318 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 DPP3Q9NY33 737 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 ACACBO00763 2458 aa15.4■□□□□ 0.06
HLA-DQB2-229ENST00000411527 EPG5Q9HCE0 2579 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 SPAG17Q6Q759 2223 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 SDK1Q7Z5N4 2213 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TISP43B9A030 160 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 H3BQV1 296 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 SLC26A4O43511 780 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 RPP40O75818 363 aaKnown RBP15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 HAPLN1P10915 354 aaPredicted RBP15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 AVPR1AP37288 418 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TAF6P49848 677 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 GTF2BQ00403 316 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 SMARCB1Q12824 385 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 GRSF1Q12849 480 aaKnown RBP eCLIP15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 RUNX3Q13761 415 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 SF3A2Q15428 464 aaKnown RBP15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 CCDC6Q16204 474 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ST3GAL2Q16842 350 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ZC2HC1CQ53FD0 456 aaPredicted RBP15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TMEM196Q5HYL7 178 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 WSCD1Q658N2 575 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 FSTL4Q6MZW2 842 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 CACNA2D4Q7Z3S7 1137 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 MAB21L3Q8N8X9 362 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 C12orf50Q8NA57 414 aaPredicted RBP15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 GAB3Q8WWW8 586 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 DDX1Q92499 740 aaKnown RBP15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 FAM83CQ9BQN1 747 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 EBF3Q9H4W6 596 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 BLOC1S4Q9NUP1 217 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ABI2Q9NYB9 513 aaPredicted RBP15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ZMYM5Q9UJ78 669 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 SLC8A2Q9UPR5 921 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 CCL26Q9Y258 94 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 C2CD2Q9Y426 696 aa15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 KMT2BQ9UMN6 2715 aaPredicted RBP15.39■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ATG13O75143 517 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TBCAO75347 108 aaKnown RBP15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 F11P03951 625 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 CCDC192P0DO97 292 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ABCD1P33897 745 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 NLRP12P59046 1061 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 BFSP1Q12934 665 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TRIM68Q6AZZ1 485 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 SLFN12LQ6IEE8 588 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TMEM150AQ86TG1 271 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 KBTBD6Q86V97 674 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 DCP1BQ8IZD4 617 aaKnown RBP15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 RASSF8Q8NHQ8 419 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 RAD54LQ92698 747 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 USP13Q92995 863 aaPredicted RBP15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 LOXL4Q96JB6 756 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 FIZ1Q96SL8 496 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 HPS4Q9NQG7 708 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 AGO2Q9UKV8 859 aaKnown RBP15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 PCDHB5Q9Y5E4 795 aa15.38■□□□□ 0.05
HLA-DQB2-229ENST00000411527 OBSL1O75147 1896 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 EML5Q05BV3 1969 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 CCDC163A0A0D9SF12 145 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 OTOL1A6NHN0 477 aaPredicted RBP15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 KPNA7A9QM74 516 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TRDMT1O14717 391 aaKnown RBP15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ZNF806P0C7X5 589 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 HMGA1P17096 107 aaKnown RBP15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 PLCG1P19174 1290 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 RAP1GAPP47736 663 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 LIMK1P53667 647 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 KARSQ15046 597 aaKnown RBP15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TXNDC8Q6A555 127 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 CC2D1AQ6P1N0 951 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms