RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 OR5AN1Q8NGI8 311 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 PPP1R14CQ8TAE6 165 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 CCHCR1Q8TD31 782 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 ST8SIA4Q92187 359 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 ZUFSPQ96AP4 578 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 COG8Q96MW5 612 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 ASB2Q96Q27 587 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 DDX23Q9BUQ8 820 aaKnown RBP5.56□□□□□ -1.52
LSM5-205ENST00000409952 PAIP1Q9H074 479 aaKnown RBP5.56□□□□□ -1.52
LSM5-205ENST00000409952 PCDH18Q9HCL0 1135 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 GALNT8Q9NY28 637 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.56□□□□□ -1.52
LSM5-205ENST00000409952 SETD1BQ9UPS6 1966 aaKnown RBP5.56□□□□□ -1.52
LSM5-205ENST00000409952 ADAMTS20P59510 1910 aa5.56□□□□□ -1.52
LSM5-205ENST00000409952 MYBBP1AQ9BQG0 1328 aaKnown RBP5.55□□□□□ -1.52
LSM5-205ENST00000409952 A0A0A6YYK5 440 aaPredicted RBP5.55□□□□□ -1.52
LSM5-205ENST00000409952 A0A1W2PR48 441 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 PYCARD-AS1I3L0S3 204 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 F2RL2O00254 374 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 P4HA2O15460 535 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 DOK2O60496 412 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 ACTL6BO94805 426 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 TK1P04183 234 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 AMY1AP04745 511 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 SLC3A2P08195 630 aaKnown RBP5.55□□□□□ -1.52
LSM5-205ENST00000409952 LTA4HP09960 611 aaKnown RBP5.55□□□□□ -1.52
LSM5-205ENST00000409952 HDCP19113 662 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 CHMP24386 653 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 THBS2P35442 1172 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 KCNJ5P48544 419 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 PIK3CGP48736 1102 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 COPAP53621 1224 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 SEC24CP53992 1094 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 PNLIPRP1P54315 467 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 PER3P56645 1201 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 ACTR2P61160 394 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 EXOSC9Q06265 439 aaKnown RBP5.55□□□□□ -1.52
LSM5-205ENST00000409952 CUL4BQ13620 913 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 ERV3-1Q14264 604 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 HABP2Q14520 560 aaPredicted RBP5.55□□□□□ -1.52
LSM5-205ENST00000409952 MAP3K21Q5TCX8 1036 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 ACAD10Q6JQN1 1059 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 USP17L6PQ6QN14 398 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 ETV3LQ6ZN32 361 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 ZSCAN30Q86W11 494 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 ZGPATQ8N5A5 531 aaKnown RBP5.55□□□□□ -1.52
LSM5-205ENST00000409952 SMARCC2Q8TAQ2 1214 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 SDCCAG3Q96C92 435 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 NOX5Q96PH1 765 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 SOX7Q9BT81 388 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 BTBD2Q9BX70 525 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 OR10A5Q9H207 317 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 CHST8Q9H2A9 424 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 PABPC3Q9H361 631 aaKnown RBP5.55□□□□□ -1.52
LSM5-205ENST00000409952 GHITMQ9H3K2 345 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 ZCCHC17Q9NP64 241 aaKnown RBP5.55□□□□□ -1.52
LSM5-205ENST00000409952 SLC39A2Q9NP94 309 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 PLSCR4Q9NRQ2 329 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 KRT84Q9NSB2 600 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 TBC1D23Q9NUY8 699 aa5.55□□□□□ -1.52
LSM5-205ENST00000409952 MTO1Q9Y2Z2 717 aaKnown RBP5.55□□□□□ -1.52
LSM5-205ENST00000409952 PABPN1LA6NDY0 278 aaKnown RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 ZNF839A8K0R7 811 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 FCHO1O14526 889 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 PRAMEF4O60810 478 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 DKC1O60832 514 aaKnown RBP eCLIP5.54□□□□□ -1.52
LSM5-205ENST00000409952 DNTTP04053 509 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 TXNP10599 105 aaKnown RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 NPPBP16860 134 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 POLD2P49005 469 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 AARSP49588 968 aaKnown RBP eCLIP5.54□□□□□ -1.52
LSM5-205ENST00000409952 PRKAA2P54646 552 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 ARF3P61204 181 aaPredicted RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 KRT83P78385 493 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 ARF1P84077 181 aaKnown RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 ATP8B2P98198 1209 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 DGKDQ16760 1214 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 TSTQ16762 297 aaKnown RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 ZNF827Q17R98 1081 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 CR1LQ2VPA4 569 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 CCDC92Q53HC0 331 aaPredicted RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 UBXN11Q5T124 520 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 BBS12Q6ZW61 710 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 KRT28Q7Z3Y7 464 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 PQLC1Q8N2U9 271 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 WDR48Q8TAF3 677 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 ZNF480Q8WV37 535 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 SNX33Q8WV41 574 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 TNPO1Q92973 898 aaKnown RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 NEIL1Q96FI4 390 aaPredicted RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 TOE1Q96GM8 510 aaKnown RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 DYDC2Q96IM9 177 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 TWNKQ96RR1 684 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 UHRF1Q96T88 793 aaPredicted RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 C1orf43Q9BWL3 253 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 GPR63Q9BZJ6 419 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 XYLT2Q9H1B5 865 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 ELAC1Q9H777 363 aaKnown RBP5.54□□□□□ -1.52
LSM5-205ENST00000409952 BCO1Q9HAY6 547 aa5.54□□□□□ -1.52
LSM5-205ENST00000409952 PARD6AQ9NPB6 346 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms