RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 FAM160B1Q5W0V3 765 aa5.21□□□□□ -1.58
PMS1-203ENST00000409593 CXorf57Q6NSI4 855 aaKnown RBP5.21□□□□□ -1.58
PMS1-203ENST00000409593 PPP1R32Q7Z5V6 425 aa5.21□□□□□ -1.58
PMS1-203ENST00000409593 CRAMP1Q96RY5 1269 aa5.21□□□□□ -1.58
PMS1-203ENST00000409593 HEPHQ9BQS7 1158 aa5.21□□□□□ -1.58
PMS1-203ENST00000409593 LRFN3Q9BTN0 628 aa5.21□□□□□ -1.58
PMS1-203ENST00000409593 TPSD1Q9BZJ3 242 aa5.21□□□□□ -1.58
PMS1-203ENST00000409593 SYNPO2LQ9H987 977 aa5.21□□□□□ -1.58
PMS1-203ENST00000409593 TLK1Q9UKI8 766 aa5.21□□□□□ -1.58
PMS1-203ENST00000409593 MGST3O14880 152 aa5.2□□□□□ -1.58
PMS1-203ENST00000409593 CTNND1O60716 968 aaKnown RBP5.2□□□□□ -1.58
PMS1-203ENST00000409593 PPFIA2O75334 1257 aa5.2□□□□□ -1.58
PMS1-203ENST00000409593 GRPP07492 148 aa5.2□□□□□ -1.58
PMS1-203ENST00000409593 U2AF1L5P0DN76 240 aaPredicted RBP5.2□□□□□ -1.58
PMS1-203ENST00000409593 SIM1P81133 766 aaPredicted RBP5.2□□□□□ -1.58
PMS1-203ENST00000409593 U2AF1Q01081 240 aaKnown RBP eCLIP5.2□□□□□ -1.58
PMS1-203ENST00000409593 ITIH3Q06033 890 aa5.2□□□□□ -1.58
PMS1-203ENST00000409593 PRR16Q569H4 304 aa5.2□□□□□ -1.58
PMS1-203ENST00000409593 RBM20Q5T481 1227 aaKnown RBP5.2□□□□□ -1.58
PMS1-203ENST00000409593 EMC10Q5UCC4 262 aa5.2□□□□□ -1.58
PMS1-203ENST00000409593 KAZNQ674X7 775 aa5.2□□□□□ -1.58
PMS1-203ENST00000409593 CAGE1Q8TC20 777 aa5.2□□□□□ -1.58
PMS1-203ENST00000409593 SLC46A1Q96NT5 459 aa5.2□□□□□ -1.58
PMS1-203ENST00000409593 NT5C1BQ96P26 610 aa5.2□□□□□ -1.58
PMS1-203ENST00000409593 SPATA31A3Q5VYP0 1347 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 A0A088AWK7 358 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 A0A1W2PPL8 197 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 PROM1O43490 865 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 ORC4O43929 436 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 SOAT2O75908 522 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 DNAJB5O75953 348 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 RHOP08100 348 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 CD6P30203 668 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 GCLCP48506 637 aaPredicted RBP5.19□□□□□ -1.58
PMS1-203ENST00000409593 TOB1P50616 345 aaPredicted RBP5.19□□□□□ -1.58
PMS1-203ENST00000409593 HNRNPMP52272 730 aaKnown RBP eCLIP5.19□□□□□ -1.58
PMS1-203ENST00000409593 MINDY4Q4G0A6 757 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 LAYNQ6UX15 382 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 SIMC1Q8NDZ2 872 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 PGBD1Q96JS3 809 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 DUSP26Q9BV47 211 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 ACTRT3Q9BYD9 372 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 B3GNT5Q9BYG0 378 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 PIH1D1Q9NWS0 290 aaKnown RBP5.19□□□□□ -1.58
PMS1-203ENST00000409593 HESX1Q9UBX0 185 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 INSL6Q9Y581 213 aa5.19□□□□□ -1.58
PMS1-203ENST00000409593 PPM1GO15355 546 aaPredicted RBP5.18□□□□□ -1.58
PMS1-203ENST00000409593 MPPED1O15442 326 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 PTH2RP49190 550 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 CLK3P49761 638 aaKnown RBP5.18□□□□□ -1.58
PMS1-203ENST00000409593 MAPK10P53779 464 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 TCF15Q12870 199 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 BOP1Q14137 746 aaKnown RBP5.18□□□□□ -1.58
PMS1-203ENST00000409593 MLC1Q15049 377 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 ANO6Q4KMQ2 910 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 ARHGAP29Q52LW3 1261 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 TMEM108Q6UXF1 575 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 OVCH2Q7RTZ1 564 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 PEG10Q86TG7 708 aaKnown RBP5.18□□□□□ -1.58
PMS1-203ENST00000409593 MAGEB6Q8N7X4 407 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 P2RX7Q99572 595 aaKnown RBP5.18□□□□□ -1.58
PMS1-203ENST00000409593 FOXJ2Q9P0K8 574 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 PLEKHM1Q9Y4G2 1056 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 TSPAN6O43657 245 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 KITP10721 976 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 EIF2B5Q13144 721 aaKnown RBP5.18□□□□□ -1.58
PMS1-203ENST00000409593 TXNRD1Q16881 649 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 NBPF8Q3BBV2 869 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 LONRF3Q496Y0 759 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 AMOTQ4VCS5 1084 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 VPS53Q5VIR6 699 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 NPNTQ6UXI9 565 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 TCEAL8Q8IYN2 117 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 RUNDC1Q96C34 613 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 OSBPL9Q96SU4 736 aa5.18□□□□□ -1.58
PMS1-203ENST00000409593 ZMAT3Q9HA38 289 aaKnown RBP5.18□□□□□ -1.58
PMS1-203ENST00000409593 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.18□□□□□ -1.58
PMS1-203ENST00000409593 KAT6AQ92794 2004 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 ADM5C9JUS6 153 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 OVOL3O00110 214 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 MYO1CO00159 1063 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 TUSC2O75896 110 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 RARRES1P49788 294 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 ZNF134P52741 427 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 NXPH1P58417 271 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 LILRA4P59901 499 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 NXNQ6DKJ4 435 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 ARHGEF25Q86VW2 580 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 COL23A1Q86Y22 540 aaPredicted RBP5.17□□□□□ -1.58
PMS1-203ENST00000409593 MYO1HQ8N1T3 1032 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 FAM136AQ96C01 138 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 PDLIM2Q96JY6 352 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 MRGPRX1Q96LB2 322 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 KLHL42Q9P2K6 505 aa5.17□□□□□ -1.58
PMS1-203ENST00000409593 SPATA31A6Q5VVP1 1343 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 FAM227AF5H4B4 570 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 DCLK1O15075 740 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 ERC2O15083 957 aa5.16□□□□□ -1.58
PMS1-203ENST00000409593 ATXN1LP0C7T5 689 aaKnown RBP5.16□□□□□ -1.58
PMS1-203ENST00000409593 NPR1P16066 1061 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms