RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 ANXA13P27216 316 aa17.92■□□□□ 0.46
SSB-202ENST00000409333 BTG3Q14201 252 aaPredicted RBP17.92■□□□□ 0.46
SSB-202ENST00000409333 SPA17Q15506 151 aa17.92■□□□□ 0.46
SSB-202ENST00000409333 ACOT1Q86TX2 421 aa17.92■□□□□ 0.46
SSB-202ENST00000409333 UNC93AQ86WB7 457 aa17.92■□□□□ 0.46
SSB-202ENST00000409333 ZNF677Q86XU0 584 aa17.92■□□□□ 0.46
SSB-202ENST00000409333 CMTR2Q8IYT2 770 aaKnown RBP17.92■□□□□ 0.46
SSB-202ENST00000409333 BCL7CQ8WUZ0 217 aaPredicted RBP17.92■□□□□ 0.46
SSB-202ENST00000409333 YME1L1Q96TA2 773 aa17.92■□□□□ 0.46
SSB-202ENST00000409333 LPIN3Q9BQK8 851 aa17.92■□□□□ 0.46
SSB-202ENST00000409333 COLEC11Q9BWP8 271 aa17.92■□□□□ 0.46
SSB-202ENST00000409333 NAGPAQ9UK23 515 aa17.92■□□□□ 0.46
SSB-202ENST00000409333 MRPL42Q9Y6G3 142 aaKnown RBP17.92■□□□□ 0.46
SSB-202ENST00000409333 TADA2AO75478 443 aa17.91■□□□□ 0.46
SSB-202ENST00000409333 IPO7O95373 1038 aaKnown RBP17.91■□□□□ 0.46
SSB-202ENST00000409333 PAX3P23760 479 aa17.91■□□□□ 0.46
SSB-202ENST00000409333 ACAT1P24752 427 aaKnown RBP17.91■□□□□ 0.46
SSB-202ENST00000409333 MSNP26038 577 aaKnown RBP17.91■□□□□ 0.46
SSB-202ENST00000409333 PASD1Q8IV76 773 aa17.91■□□□□ 0.46
SSB-202ENST00000409333 CCAR2Q8N163 923 aaKnown RBP17.91■□□□□ 0.46
SSB-202ENST00000409333 C12orf29Q8N999 325 aa17.91■□□□□ 0.46
SSB-202ENST00000409333 HEXIM2Q96MH2 286 aaKnown RBP17.91■□□□□ 0.46
SSB-202ENST00000409333 DDX43Q9NXZ2 648 aaKnown RBP17.91■□□□□ 0.46
SSB-202ENST00000409333 TAS2R14Q9NYV8 317 aa17.91■□□□□ 0.46
SSB-202ENST00000409333 SLC4A7Q9Y6M7 1214 aa17.91■□□□□ 0.46
SSB-202ENST00000409333 TMCO5BA8MYB1 307 aa17.91■□□□□ 0.46
SSB-202ENST00000409333 CYP11A1P05108 521 aa17.91■□□□□ 0.46
SSB-202ENST00000409333 HTRA4P83105 476 aaPredicted RBP17.91■□□□□ 0.46
SSB-202ENST00000409333 CCDC122Q5T0U0 273 aa17.91■□□□□ 0.46
SSB-202ENST00000409333 ALKBH5Q6P6C2 394 aaKnown RBP17.91■□□□□ 0.46
SSB-202ENST00000409333 GPR62Q9BZJ7 368 aa17.91■□□□□ 0.46
SSB-202ENST00000409333 PCDHB8Q9UN66 801 aa17.91■□□□□ 0.46
SSB-202ENST00000409333 PCDHA13Q9Y5I0 950 aa17.91■□□□□ 0.46
SSB-202ENST00000409333 FAM163BP0C2L3 166 aa17.9■□□□□ 0.46
SSB-202ENST00000409333 VDRP11473 427 aa17.9■□□□□ 0.46
SSB-202ENST00000409333 TKTP29401 623 aaKnown RBP17.9■□□□□ 0.46
SSB-202ENST00000409333 MAGEA10P43363 369 aaPredicted RBP17.9■□□□□ 0.46
SSB-202ENST00000409333 LHX1P48742 406 aa17.9■□□□□ 0.46
SSB-202ENST00000409333 ALDH7A1P49419 539 aaKnown RBP17.9■□□□□ 0.46
SSB-202ENST00000409333 PSMC1P62191 440 aaKnown RBP17.9■□□□□ 0.46
SSB-202ENST00000409333 KRT83P78385 493 aa17.9■□□□□ 0.46
SSB-202ENST00000409333 CCDC142Q17RM4 750 aa17.9■□□□□ 0.46
SSB-202ENST00000409333 SPOUT1Q5T280 376 aaKnown RBP17.9■□□□□ 0.46
SSB-202ENST00000409333 SLC9A7Q96T83 725 aa17.9■□□□□ 0.46
SSB-202ENST00000409333 RTP3Q9BQQ7 232 aa17.9■□□□□ 0.46
SSB-202ENST00000409333 PACSIN1Q9BY11 444 aa17.9■□□□□ 0.46
SSB-202ENST00000409333 FAM49BQ9NUQ9 324 aa17.9■□□□□ 0.46
SSB-202ENST00000409333 NR2E3Q9Y5X4 410 aa17.9■□□□□ 0.46
SSB-202ENST00000409333 RANBP2P49792 3224 aaKnown RBP17.89■□□□□ 0.46
SSB-202ENST00000409333 RCCD1A6NED2 376 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 ESPNB1AK53 854 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 TRAPPC3O43617 180 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 TYMPP19971 482 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 MAGEA1P43355 309 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 SGO2Q562F6 1265 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 C9orf50Q5SZB4 431 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 KIAA0319Q5VV43 1072 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 OVOS1Q6IE37 1185 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 FUT10Q6P4F1 479 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 KCNT2Q6UVM3 1135 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 METTL23Q86XA0 190 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 HERC6Q8IVU3 1022 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 REXO1L1PQ8IX06 675 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 CYFIP2Q96F07 1278 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 PPP1R13BQ96KQ4 1090 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 B3GALT6Q96L58 329 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 ZBED2Q9BTP6 218 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 PDCL3Q9H2J4 239 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 DSEQ9UL01 958 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 O00370 1275 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 ATP2C2O75185 946 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 ABL1P00519 1130 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 ATP2A2P16615 1042 aaKnown RBP17.89■□□□□ 0.45
SSB-202ENST00000409333 VAV2P52735 878 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 CLEC16AQ2KHT3 1053 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 RASIP1Q5U651 963 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 FAM171A1Q5VUB5 890 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 KIAA1328Q86T90 577 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 CRYBG2Q8N1P7 616 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 B3GALNT2Q8NCR0 500 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 KCND1Q9NSA2 647 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 PCDHGC3Q9UN70 934 aa17.89■□□□□ 0.45
SSB-202ENST00000409333 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.89■□□□□ 0.45
SSB-202ENST00000409333 SF3B1O75533 1304 aaKnown RBP eCLIP17.88■□□□□ 0.451e-6■■■■■ 66.8
SSB-202ENST00000409333 PATJQ8NI35 1801 aa17.88■□□□□ 0.45
SSB-202ENST00000409333 TNRC18O15417 2968 aaPredicted RBP17.88■□□□□ 0.45
SSB-202ENST00000409333 ARHGEF37A1IGU5 675 aa17.88■□□□□ 0.45
SSB-202ENST00000409333 ZSCAN12O43309 604 aa17.88■□□□□ 0.45
SSB-202ENST00000409333 MED7O43513 233 aa17.88■□□□□ 0.45
SSB-202ENST00000409333 CYP1A1P04798 512 aaPredicted RBP17.88■□□□□ 0.45
SSB-202ENST00000409333 UNGP13051 313 aaPredicted RBP17.88■□□□□ 0.45
SSB-202ENST00000409333 YWHAHQ04917 246 aaPredicted RBP17.88■□□□□ 0.45
SSB-202ENST00000409333 PPP1R26Q5T8A7 1209 aaPredicted RBP17.88■□□□□ 0.45
SSB-202ENST00000409333 COLGALT1Q8NBJ5 622 aa17.88■□□□□ 0.45
SSB-202ENST00000409333 SPATA18Q8TC71 538 aa17.88■□□□□ 0.45
SSB-202ENST00000409333 IGSF21Q96ID5 467 aa17.88■□□□□ 0.45
SSB-202ENST00000409333 TNIP3Q96KP6 325 aa17.88■□□□□ 0.45
SSB-202ENST00000409333 ZNF558Q96NG5 402 aa17.88■□□□□ 0.45
SSB-202ENST00000409333 SYT15Q9BQS2 421 aa17.88■□□□□ 0.45
SSB-202ENST00000409333 MTIF3Q9H2K0 278 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms