RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CCHCR1Q8TD31 782 aa5.94□□□□□ -1.46
HMGB1P13-201ENST00000406019 RAB24Q969Q5 203 aa5.94□□□□□ -1.46
HMGB1P13-201ENST00000406019 FUBP1Q96AE4 644 aaKnown RBP5.94□□□□□ -1.46
HMGB1P13-201ENST00000406019 ISCA1Q9BUE6 129 aa5.94□□□□□ -1.46
HMGB1P13-201ENST00000406019 MRIQ9BWK5 157 aa5.94□□□□□ -1.46
HMGB1P13-201ENST00000406019 WDCPQ9H6R7 721 aa5.94□□□□□ -1.46
HMGB1P13-201ENST00000406019 ZNF287Q9HBT7 754 aa5.94□□□□□ -1.46
HMGB1P13-201ENST00000406019 POGKQ9P215 609 aa5.94□□□□□ -1.46
HMGB1P13-201ENST00000406019 REXO2Q9Y3B8 237 aaKnown RBP5.94□□□□□ -1.46
HMGB1P13-201ENST00000406019 PCDHGB3Q9Y5G1 929 aa5.94□□□□□ -1.46
HMGB1P13-201ENST00000406019 MYBBP1AQ9BQG0 1328 aaKnown RBP5.94□□□□□ -1.46
HMGB1P13-201ENST00000406019 hCG_1642624A0A1W2PR95 340 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 TEX33O43247 280 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 CFIP05156 583 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 EN2P19622 333 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 SLC7A1P30825 629 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 ARFIP2P53365 341 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 UBXN2BQ14CS0 331 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 ALFQ53S48 1182 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 B3GNTL1Q67FW5 361 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 ZNF529Q6P280 563 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 MED25Q71SY5 747 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 ARHGEF19Q8IW93 802 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 TMEM41AQ96HV5 264 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 PNPLA8Q9NP80 782 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 SAGE1Q9NXZ1 904 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 OGDHLQ9ULD0 1010 aa5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 USP15Q9Y4E8 981 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P13-201ENST00000406019 COL4A3Q01955 1670 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 A0A1W2PPC4 97 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 ADAMTS3O15072 1205 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 KITP10721 976 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 LAG3P18627 525 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 PROZP22891 400 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 CCT5P48643 541 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 HTRA4P83105 476 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 OCA2Q04671 838 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 SLFN5Q08AF3 891 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 BIRC3Q13489 604 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 RSPH3Q86UC2 560 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 FAM90A1Q86YD7 464 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 PROKR1Q8TCW9 393 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 SUCLG2Q96I99 432 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 TMX3Q96JJ7 454 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 TTLL2Q9BWV7 592 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 IKZF4Q9H2S9 585 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 STK32BQ9NY57 414 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 TERF2IPQ9NYB0 399 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 CPNE7Q9UBL6 633 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 FEZ2Q9UHY8 353 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 RUVBL1Q9Y265 456 aaKnown RBP5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 GPR52Q9Y2T5 361 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 PCDHGB2Q9Y5G2 931 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 FPGT-TNNI3KV9GXZ4 949 aa5.92□□□□□ -1.46
HMGB1P13-201ENST00000406019 FOXN1O15353 648 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 POMCP01189 267 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 BRAFP15056 766 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 PRDX5P30044 214 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 SUMO3P55854 103 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 PMS2P11Q13670 270 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 FLYWCH1Q4VC44 716 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 EMC10Q5UCC4 262 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 CCDC70Q6NSX1 233 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 CLEC4GQ6UXB4 293 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 GADL1Q6ZQY3 521 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 UBE3BQ7Z3V4 1068 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 PPP1R3BQ86XI6 285 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 VRK3Q8IV63 474 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 LIX1LQ8IVB5 337 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 SH2D3CQ8N5H7 860 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 CELF5Q8N6W0 485 aaKnown RBP5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 KBTBD7Q8WVZ9 684 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 CCT6BQ92526 530 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 NMD3Q96D46 503 aaKnown RBP5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 CHFRQ96EP1 664 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 PRRX2Q99811 253 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 SENP7Q9BQF6 1050 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 DPH1Q9BZG8 443 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 MRPL46Q9H2W6 279 aaKnown RBP5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 SARS2Q9NP81 518 aaKnown RBP5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 PIH1D1Q9NWS0 290 aaKnown RBP5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 SYBUQ9NX95 663 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 VSX1Q9NZR4 365 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 COL20A1Q9P218 1284 aa5.91□□□□□ -1.46
HMGB1P13-201ENST00000406019 TCRBV7S2A1N4TA0A589 114 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 APOL1O14791 398 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 NDUFA10O95299 355 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 ABHD16AO95870 558 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 THP07101 528 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 PARP1P09874 1014 aaKnown RBP5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 SBK3P0C264 359 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 SRGNP10124 158 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 HSD3B1P14060 373 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 ZEB1P37275 1124 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 TECP42680 631 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 HSPA7P48741 367 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 INHBCP55103 352 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 ICA1Q05084 483 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 PUM3Q15397 648 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms