RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 TUBGCP5Q96RT8 1024 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 GLIS2Q9BZE0 524 aaPredicted RBP10.07□□□□□ -0.8
SMC1B-202ENST00000404354 KRT82Q9NSB4 513 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 C1orf112Q9NSG2 853 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 WDR35Q9P2L0 1181 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 PSMC3IPQ9P2W1 217 aaPredicted RBP10.07□□□□□ -0.8
SMC1B-202ENST00000404354 PCSK1NQ9UHG2 260 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 UMODL1Q5DID0 1318 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 TYROBPO43914 113 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 OPHN1O60890 802 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 MT-ND3P03897 115 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 YWHABP31946 246 aaKnown RBP10.07□□□□□ -0.8
SMC1B-202ENST00000404354 EPHB1P54762 984 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 YWHAGP61981 247 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMC1B-202ENST00000404354 CAV1Q03135 178 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 HIF1AQ16665 826 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 WDR72Q3MJ13 1102 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 SLC45A4Q5BKX6 768 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 CENPUQ71F23 418 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 POU5F2Q8N7G0 328 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 FNBP1Q96RU3 617 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 CSRNP1Q96S65 589 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 AGTPBP1Q9UPW5 1226 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 LRCH1Q9Y2L9 728 aa10.07□□□□□ -0.8
SMC1B-202ENST00000404354 E2F8A0AVK6 867 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 C2CD2LO14523 706 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 LIN7AO14910 233 aaPredicted RBP10.06□□□□□ -0.8
SMC1B-202ENST00000404354 LIASO43766 372 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 MTA2O94776 668 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 TJP3O95049 919 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 GSTT1P30711 240 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 MAMLD1Q13495 774 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 BRDTQ58F21 947 aaPredicted RBP10.06□□□□□ -0.8
SMC1B-202ENST00000404354 DPH6Q7L8W6 267 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 ARID3BQ8IVW6 561 aaPredicted RBP10.06□□□□□ -0.8
SMC1B-202ENST00000404354 CDAN1Q8IWY9 1227 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 GALNT15Q8N3T1 639 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 B4GALNT2Q8NHY0 566 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 SH3TC2Q8TF17 1288 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 PYDC1Q8WXC3 89 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 FAM136AQ96C01 138 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 NYAP2Q9P242 653 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 MYPNQ86TC9 1320 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 PLIN4Q96Q06 1357 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 MAST2Q6P0Q8 1798 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 PIK3R2O00459 728 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 NFIBO00712 420 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 UNGP13051 313 aaPredicted RBP10.06□□□□□ -0.8
SMC1B-202ENST00000404354 CCNFP41002 786 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 PSMC5P62195 406 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 ORC1Q13415 861 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 PEX6Q13608 980 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 BMPR2Q13873 1038 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 RASA2Q15283 850 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 TREML1Q86YW5 311 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 ENDOVQ8N8Q3 282 aaKnown RBP10.06□□□□□ -0.8
SMC1B-202ENST00000404354 BSNDQ8WZ55 320 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 UBE2OQ9C0C9 1292 aaKnown RBP10.06□□□□□ -0.8
SMC1B-202ENST00000404354 CYP4F11Q9HBI6 524 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 SMG5Q9UPR3 1016 aaKnown RBP10.06□□□□□ -0.8
SMC1B-202ENST00000404354 IKBKGQ9Y6K9 419 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 CLUHO75153 1309 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 TESPA1A2RU30 521 aaPredicted RBP10.06□□□□□ -0.8
SMC1B-202ENST00000404354 KLHL33A6NCF5 533 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 ATP2A1O14983 1001 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 RFX1P22670 979 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 MAN1A1P33908 653 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 NPTX2P47972 431 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 GEMIN4P57678 1058 aaKnown RBP10.06□□□□□ -0.8
SMC1B-202ENST00000404354 FAAP100Q0VG06 881 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 MEX3CQ5U5Q3 659 aaKnown RBP10.06□□□□□ -0.8
SMC1B-202ENST00000404354 IGDCC3Q8IVU1 814 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 ZNF516Q92618 1163 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 CFAP36Q96G28 342 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 SERAC1Q96JX3 654 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 ZBTB45Q96K62 511 aaPredicted RBP10.06□□□□□ -0.8
SMC1B-202ENST00000404354 KMT5AQ9NQR1 393 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 COL20A1Q9P218 1284 aa10.06□□□□□ -0.8
SMC1B-202ENST00000404354 CCDC160A6NGH7 325 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 RNF8O76064 485 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 RTN3O95197 1032 aaPredicted RBP10.05□□□□□ -0.8
SMC1B-202ENST00000404354 NPTXRO95502 500 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 SPATA31D3P0C874 917 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 GNA15P30679 374 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 C1orf146Q5VVC0 180 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 CDHR3Q6ZTQ4 885 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 SPATA31D4Q6ZUB0 917 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 TMEM179Q6ZVK1 233 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 SLC9A9Q8IVB4 645 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 MAIP1Q8WWC4 291 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 SLCO2A1Q92959 643 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 RABGEF1Q9UJ41 708 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 TBX20Q9UMR3 447 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 ATP8B3O60423 1300 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 SIGLEC16A6NMB1 481 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 PPEF1O14829 653 aaPredicted RBP10.05□□□□□ -0.8
SMC1B-202ENST00000404354 TCEA3O75764 348 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 CYP1A1P04798 512 aaPredicted RBP10.05□□□□□ -0.8
SMC1B-202ENST00000404354 MCL1Q07820 350 aa10.05□□□□□ -0.8
SMC1B-202ENST00000404354 UBAP2LQ14157 1087 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms