RNA–Protein interactions for RNA: ENST00000400777.7

CASP9-204, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-204ENST00000400777 NME7Q9Y5B8 376 aa17.16■□□□□ 0.34
CASP9-204ENST00000400777 TMCO5BA8MYB1 307 aa17.15■□□□□ 0.34
CASP9-204ENST00000400777 MED7O43513 233 aa17.15■□□□□ 0.34
CASP9-204ENST00000400777 HCRTO43612 131 aa17.15■□□□□ 0.34
CASP9-204ENST00000400777 GJB5O95377 273 aa17.15■□□□□ 0.34
CASP9-204ENST00000400777 BCAR1P56945 870 aa17.15■□□□□ 0.34
CASP9-204ENST00000400777 SPOUT1Q5T280 376 aaKnown RBP17.15■□□□□ 0.34
CASP9-204ENST00000400777 KIAA1328Q86T90 577 aa17.15■□□□□ 0.34
CASP9-204ENST00000400777 METTL23Q86XA0 190 aa17.15■□□□□ 0.34
CASP9-204ENST00000400777 TNIP3Q96KP6 325 aa17.15■□□□□ 0.34
CASP9-204ENST00000400777 PCDHB18PQ96TA0 734 aa17.15■□□□□ 0.34
CASP9-204ENST00000400777 ZSWIM1Q9BR11 485 aa17.15■□□□□ 0.34
CASP9-204ENST00000400777 DDX43Q9NXZ2 648 aaKnown RBP17.15■□□□□ 0.34
CASP9-204ENST00000400777 KIAA1257Q9ULG3 409 aa17.15■□□□□ 0.34
CASP9-204ENST00000400777 NT5C1B-RDH14C9J2C7 533 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 VDRP11473 427 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 SSTR3P32745 418 aaPredicted RBP17.14■□□□□ 0.33
CASP9-204ENST00000400777 SGO2Q562F6 1265 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 C10orf76Q5T2E6 689 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 OSTM1Q86WC4 334 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 CMTR2Q8IYT2 770 aaKnown RBP17.14■□□□□ 0.33
CASP9-204ENST00000400777 C12orf29Q8N999 325 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 HERVK_113Q902F9 699 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 PPP1R13BQ96KQ4 1090 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 ZBED2Q9BTP6 218 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 DPEP3Q9H4B8 488 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 CWH43Q9H720 699 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 NR2E3Q9Y5X4 410 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 SLC4A7Q9Y6M7 1214 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 CYP11A1P05108 521 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 CFHP08603 1231 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 GZMAP12544 262 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 VAV2P52735 878 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 PASD1Q8IV76 773 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 CRYBG2Q8N1P7 616 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 SPATA18Q8TC71 538 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 MTIF3Q9H2K0 278 aaKnown RBP17.14■□□□□ 0.33
CASP9-204ENST00000400777 MARCH5Q9NX47 278 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 TAS2R14Q9NYV8 317 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 NENFQ9UMX5 172 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 PCDHB8Q9UN66 801 aa17.14■□□□□ 0.33
CASP9-204ENST00000400777 SF3B1O75533 1304 aaKnown RBP eCLIP17.13■□□□□ 0.33
CASP9-204ENST00000400777 A0A0U1RQJ8 604 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 FAM170AA1A519 330 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 TYMPP19971 482 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 ARHGAP29Q52LW3 1261 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 OVOS1Q6IE37 1185 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 TRIM72Q6ZMU5 477 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 TMEM173Q86WV6 379 aaPredicted RBP17.13■□□□□ 0.33
CASP9-204ENST00000400777 DNAAF5Q86Y56 855 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 REXO1L1PQ8IX06 675 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 TXLNBQ8N3L3 684 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 B3GALNT2Q8NCR0 500 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 ATRIPQ8WXE1 791 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 CYFIP2Q96F07 1278 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 LZTFL1Q9NQ48 299 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 PCDHGC3Q9UN70 934 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 TFR2Q9UP52 801 aa17.13■□□□□ 0.33
CASP9-204ENST00000400777 RANBP2P49792 3224 aaKnown RBP17.13■□□□□ 0.33
CASP9-204ENST00000400777 FNDC1Q4ZHG4 1894 aaPredicted RBP17.12■□□□□ 0.33
CASP9-204ENST00000400777 COL4A6Q14031 1691 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 GOLGA6L9A6NEM1 432 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 CYP1A1P04798 512 aaPredicted RBP17.12■□□□□ 0.33
CASP9-204ENST00000400777 ACAT1P24752 427 aaKnown RBP17.12■□□□□ 0.33
CASP9-204ENST00000400777 YWHAHQ04917 246 aaPredicted RBP17.12■□□□□ 0.33
CASP9-204ENST00000400777 KIF5AQ12840 1032 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 CNGA2Q16280 664 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 CLEC16AQ2KHT3 1053 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 SLC9A7Q96T83 725 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 PACSIN1Q9BY11 444 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 FAM49BQ9NUQ9 324 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 CEP83Q9Y592 693 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 RCCD1A6NED2 376 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 O00370 1275 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 SYN3O14994 580 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 RTN2O75298 545 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 FTLP02792 175 aaPredicted RBP17.12■□□□□ 0.33
CASP9-204ENST00000400777 UNGP13051 313 aaPredicted RBP17.12■□□□□ 0.33
CASP9-204ENST00000400777 ATP2A2P16615 1042 aaKnown RBP17.12■□□□□ 0.33
CASP9-204ENST00000400777 PCSK1P29120 753 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 PSMC1P62191 440 aaKnown RBP17.12■□□□□ 0.33
CASP9-204ENST00000400777 STILQ15468 1287 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 FAM171A1Q5VUB5 890 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 FUT10Q6P4F1 479 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 KCNT2Q6UVM3 1135 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 THEM5Q8N1Q8 247 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 PHOSPHO2Q8TCD6 241 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 CPA5Q8WXQ8 436 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 GPR62Q9BZJ7 368 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 LACRTQ9GZZ8 138 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 ISCUQ9H1K1 167 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 TSPAN16Q9UKR8 245 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.12■□□□□ 0.33
CASP9-204ENST00000400777 INSL6Q9Y581 213 aa17.12■□□□□ 0.33
CASP9-204ENST00000400777 MRPL42Q9Y6G3 142 aaKnown RBP17.12■□□□□ 0.33
CASP9-204ENST00000400777 KRT86O43790 486 aa17.11■□□□□ 0.33
CASP9-204ENST00000400777 LSM8O95777 96 aaKnown RBP17.11■□□□□ 0.33
CASP9-204ENST00000400777 H2AFZP0C0S5 128 aa17.11■□□□□ 0.33
CASP9-204ENST00000400777 PTPN1P18031 435 aaKnown RBP17.11■□□□□ 0.33
CASP9-204ENST00000400777 TKTP29401 623 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms