RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 FDXACB1Q9BRP7 624 aaPredicted RBP18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CHST7Q9NS84 486 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SIX4Q9UIU6 781 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 NOVA2Q9UNW9 492 aaKnown RBP18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 MCM3APO60318 1980 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ATXN2Q99700 1313 aaKnown RBP18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CCL15-CCL14A0A0B4J2E2 113 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 BTBD19C9JJ37 291 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TCEA3O75764 348 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 KRT19P08727 400 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 IQCF3P0C7M6 154 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ANK1P16157 1881 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 GABRB2P47870 512 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ATP1A2P50993 1020 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RAD23BP54727 409 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 PDCLQ13371 301 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CCL15Q16663 113 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 FAM110CQ1W6H9 321 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 EAPPQ56P03 285 aaPredicted RBP18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TFDP3Q5H9I0 405 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 MICALCLQ6ZW33 695 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 DPP9Q86TI2 863 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TFAP2BQ92481 460 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RNF25Q96BH1 459 aaPredicted RBP18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TMEM176AQ96HP8 235 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ACAP3Q96P50 834 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SLITRK1Q96PX8 696 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SEMA4AQ9H3S1 761 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 NXF1Q9UBU9 619 aaKnown RBP18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RSPH14Q9UHP6 348 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ANAPC5Q9UJX4 755 aa18.72■□□□□ 0.59
HLA-DQB1-204ENST00000399084 NDUFAB1O14561 156 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CILPO75339 1184 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SNAI1O95863 264 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 KRT3P12035 628 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ARF4P18085 180 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ADCY8P40145 1251 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 GRM5P41594 1212 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SSR1P43307 286 aaKnown RBP18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SNX16P57768 344 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RPL7AP62424 266 aaKnown RBP18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 PTPN11Q06124 597 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TMEM132DQ14C87 1099 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CXorf38Q8TB03 319 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SERPINB12Q96P63 405 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 MCEEQ96PE7 176 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 NCAPGQ9BPX3 1015 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 BCCIPQ9P287 314 aaKnown RBP eCLIP18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 USTQ9Y2C2 406 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 PLXNB2O15031 1838 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SLC15A5A6NIM6 579 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RGS16O15492 202 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 FAM107AO95990 144 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CD19P15391 556 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RDXP35241 583 aaKnown RBP18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 MAGOHP61326 146 aaKnown RBP18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 OSTNP61366 133 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 IGBP1P78318 339 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 INCA1Q0VD86 236 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SLC10A6Q3KNW5 377 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 C2CD6Q53TS8 623 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 JADE1Q6IE81 842 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TAOK1Q7L7X3 1001 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SRLQ86TD4 932 aa18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 NKD2Q969F2 451 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 BARX2Q9UMQ3 279 aaPredicted RBP18.71■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RASGRF2O14827 1237 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 GJB1P08034 283 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 NFICP08651 508 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 MYO1EQ12965 1108 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SNX1Q13596 522 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 GRIK4Q16099 956 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ZNF394Q53GI3 561 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 TNFAIP8L3Q5GJ75 292 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SPOCD1Q6ZMY3 1216 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 GPR142Q7Z601 462 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 PLEKHH3Q7Z736 793 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 PHLDB2Q86SQ0 1253 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CEP120Q8N960 986 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 NLRP7Q8WX94 980 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 HPDLQ96IR7 371 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 MAML3Q96JK9 1138 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CCDC114Q96M63 670 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 TINF2Q9BSI4 451 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 DNAI2Q9GZS0 605 aa18.7■□□□□ 0.58
HLA-DQB1-204ENST00000399084 GMNCA6NCL1 334 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SMAPO00193 183 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 LIASO43766 372 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 TSPAN1O60635 241 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 TTC4O95801 387 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 KRT1P04264 644 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ITGB3P05106 788 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 HPDP32754 393 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ADCYAP1R1P41586 468 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 GUCY1A3Q02108 690 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ACVR2BQ13705 512 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 LLGL2Q6P1M3 1020 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 DENND1BQ6P3S1 775 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SLC4A11Q8NBS3 891 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CCDC77Q9BR77 488 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms