RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 NME7Q9Y5B8 376 aa17.93■□□□□ 0.46
APTR-201ENST00000398043 IKBKBO14920 756 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 SOAT2O75908 522 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 MICAL2O94851 1124 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 SMC2O95347 1197 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 BMP6P22004 513 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 LHX1P48742 406 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 MYL6P60660 151 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 ENPEPQ07075 957 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 ZACNQ401N2 412 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 INTS6LQ5JSJ4 861 aaKnown RBP17.92■□□□□ 0.46
APTR-201ENST00000398043 CEP135Q66GS9 1140 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 CLEC17AQ6ZS10 378 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 TMC8Q8IU68 726 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 ZC3H3Q8IXZ2 948 aaKnown RBP17.92■□□□□ 0.46
APTR-201ENST00000398043 UBALD2Q8IYN6 164 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 ADGRF2Q8IZF7 708 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 HS6ST3Q8IZP7 471 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 SLC44A3Q8N4M1 653 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 C2orf15Q8WU43 125 aaKnown RBP17.92■□□□□ 0.46
APTR-201ENST00000398043 NXPE3Q969Y0 559 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 TCEAL4Q96EI5 215 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 CORO1BQ9BR76 489 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 FRMD4BQ9Y2L6 1034 aa17.92■□□□□ 0.46
APTR-201ENST00000398043 TMEM221A6NGB7 291 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 M0R296 226 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 TACC1O75410 805 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 FAM163BP0C2L3 166 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 HAPLN1P10915 354 aaPredicted RBP17.91■□□□□ 0.46
APTR-201ENST00000398043 CEBPBP17676 345 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 ATF6P18850 670 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 WARSP23381 471 aaKnown RBP17.91■□□□□ 0.46
APTR-201ENST00000398043 ACAT1P24752 427 aaKnown RBP17.91■□□□□ 0.46
APTR-201ENST00000398043 LMO2P25791 158 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 ATICP31939 592 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 CDR1P51861 262 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 PMS1P54277 932 aaKnown RBP17.91■□□□□ 0.46
APTR-201ENST00000398043 ADAM9Q13443 819 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 TDGQ13569 410 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 CCDC142Q17RM4 750 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 FAM171BQ6P995 826 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 HFE2Q6ZVN8 426 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 DCP1BQ8IZD4 617 aaKnown RBP17.91■□□□□ 0.46
APTR-201ENST00000398043 ADSSL1Q8N142 457 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 SPPL2BQ8TCT7 592 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 FGF14Q92915 247 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 ZNF512Q96ME7 567 aaPredicted RBP17.91■□□□□ 0.46
APTR-201ENST00000398043 MAN1B1Q9UKM7 699 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 DUSP12Q9UNI6 340 aa17.91■□□□□ 0.46
APTR-201ENST00000398043 MRPS23Q9Y3D9 190 aaKnown RBP17.91■□□□□ 0.46
APTR-201ENST00000398043 KIF26AQ9ULI4 1882 aaPredicted RBP17.9■□□□□ 0.46
APTR-201ENST00000398043 COL4A2P08572 1712 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 KINO60870 393 aaKnown RBP17.9■□□□□ 0.46
APTR-201ENST00000398043 CD44P16070 742 aaKnown RBP17.9■□□□□ 0.46
APTR-201ENST00000398043 RPL13P26373 211 aaKnown RBP17.9■□□□□ 0.46
APTR-201ENST00000398043 VAMP7P51809 220 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 UBE2HP62256 183 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 MYL7Q01449 175 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 PLD1Q13393 1074 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 PARM1Q6UWI2 310 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 SV2AQ7L0J3 742 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 LEMD2Q8NC56 503 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 ING5Q8WYH8 240 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 PSMG2Q969U7 264 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 MRPL45Q9BRJ2 306 aaKnown RBP17.9■□□□□ 0.46
APTR-201ENST00000398043 MKNK1Q9BUB5 465 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 RPP25Q9BUL9 199 aaKnown RBP17.9■□□□□ 0.46
APTR-201ENST00000398043 GTPBP4Q9BZE4 634 aaKnown RBP17.9■□□□□ 0.46
APTR-201ENST00000398043 GDE1Q9NZC3 331 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 HOOK1Q9UJC3 728 aaKnown RBP17.9■□□□□ 0.46
APTR-201ENST00000398043 ASB3Q9Y575 518 aa17.9■□□□□ 0.46
APTR-201ENST00000398043 NARSO43776 548 aaKnown RBP17.89■□□□□ 0.45
APTR-201ENST00000398043 ATP2C2O75185 946 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 PCSK1P29120 753 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 PSMC2P35998 433 aaKnown RBP17.89■□□□□ 0.45
APTR-201ENST00000398043 ALDH1A3P47895 512 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 TUFMP49411 452 aaKnown RBP17.89■□□□□ 0.45
APTR-201ENST00000398043 EPHB3P54753 998 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 TSPY1Q01534 308 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 PPP3CAQ08209 521 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 NCOA4Q13772 614 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 WDR72Q3MJ13 1102 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 ANKRD40Q6AI12 368 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 IQCEQ6IPM2 695 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 INTS8Q75QN2 995 aaKnown RBP17.89■□□□□ 0.45
APTR-201ENST00000398043 DNAJB7Q7Z6W7 309 aaPredicted RBP17.89■□□□□ 0.45
APTR-201ENST00000398043 ELMOD1Q8N336 334 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 SYAP1Q96A49 352 aaPredicted RBP17.89■□□□□ 0.45
APTR-201ENST00000398043 ZNF334Q9HCZ1 680 aaPredicted RBP17.89■□□□□ 0.45
APTR-201ENST00000398043 ABCB6Q9NP58 842 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 CRTAC1Q9NQ79 661 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 GTF3C4Q9UKN8 822 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 R3HCC1Q9Y3T6 440 aaKnown RBP17.89■□□□□ 0.45
APTR-201ENST00000398043 PCDHB5Q9Y5E4 795 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 NUMBLQ9Y6R0 609 aa17.89■□□□□ 0.45
APTR-201ENST00000398043 MYBPHLA2RUH7 354 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 ZNF197O14709 1029 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 TRPC3Q13507 836 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 MORC3Q14149 939 aa17.88■□□□□ 0.45
APTR-201ENST00000398043 NFE2Q16621 373 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms