RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PPP1R13BQ96KQ4 1090 aa22.55■■□□□ 1.2
CPNE1-204ENST00000397443 ZBED2Q9BTP6 218 aa22.55■■□□□ 1.2
CPNE1-204ENST00000397443 STXBP5LQ9Y2K9 1186 aa22.55■■□□□ 1.2
CPNE1-204ENST00000397443 COL4A6Q14031 1691 aa22.55■■□□□ 1.2
CPNE1-204ENST00000397443 ZSCAN12O43309 604 aa22.55■■□□□ 1.2
CPNE1-204ENST00000397443 PAEPP09466 180 aa22.55■■□□□ 1.2
CPNE1-204ENST00000397443 WARSP23381 471 aaKnown RBP22.55■■□□□ 1.2
CPNE1-204ENST00000397443 MAGEA1P43355 309 aa22.55■■□□□ 1.2
CPNE1-204ENST00000397443 ZNF689Q96CS4 500 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-204ENST00000397443 SUSD3Q96L08 255 aa22.55■■□□□ 1.2
CPNE1-204ENST00000397443 DDX43Q9NXZ2 648 aaKnown RBP22.55■■□□□ 1.2
CPNE1-204ENST00000397443 ADAM28Q9UKQ2 775 aa22.55■■□□□ 1.2
CPNE1-204ENST00000397443 RCCD1A6NED2 376 aa22.54■■□□□ 1.2
CPNE1-204ENST00000397443 ATP2C2O75185 946 aa22.54■■□□□ 1.2
CPNE1-204ENST00000397443 LCA5LO95447 670 aa22.54■■□□□ 1.2
CPNE1-204ENST00000397443 ALDH7A1P49419 539 aaKnown RBP22.54■■□□□ 1.2
CPNE1-204ENST00000397443 CCDC142Q17RM4 750 aa22.54■■□□□ 1.2
CPNE1-204ENST00000397443 CYFIP2Q96F07 1278 aa22.54■■□□□ 1.2
CPNE1-204ENST00000397443 COLEC11Q9BWP8 271 aa22.54■■□□□ 1.2
CPNE1-204ENST00000397443 CWH43Q9H720 699 aa22.54■■□□□ 1.2
CPNE1-204ENST00000397443 MARCH5Q9NX47 278 aa22.54■■□□□ 1.2
CPNE1-204ENST00000397443 TRIM10Q9UDY6 481 aa22.54■■□□□ 1.2
CPNE1-204ENST00000397443 ABL1P00519 1130 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 ANXA13P27216 316 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 SGO2Q562F6 1265 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 UNC93AQ86WB7 457 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 CEP57Q86XR8 500 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 ZNF677Q86XU0 584 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 REXO1L1PQ8IX06 675 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 B3GALT6Q96L58 329 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 SLC4A7Q9Y6M7 1214 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 M0QZQ0 153 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 TKTP29401 623 aaKnown RBP22.53■■□□□ 1.2
CPNE1-204ENST00000397443 NAA35Q5VZE5 725 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 METTL23Q86XA0 190 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 BCL7CQ8WUZ0 217 aaPredicted RBP22.53■■□□□ 1.2
CPNE1-204ENST00000397443 CPA5Q8WXQ8 436 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 TMEM175Q9BSA9 504 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 LACRTQ9GZZ8 138 aa22.53■■□□□ 1.2
CPNE1-204ENST00000397443 RC3H2Q9HBD1 1191 aaKnown RBP22.53■■□□□ 1.2
CPNE1-204ENST00000397443 MRPL42Q9Y6G3 142 aaKnown RBP22.53■■□□□ 1.2
CPNE1-204ENST00000397443 TMEM189-UBE2V1I3L0A0 370 aa22.52■■□□□ 1.2
CPNE1-204ENST00000397443 ABCB4P21439 1286 aa22.52■■□□□ 1.2
CPNE1-204ENST00000397443 RANBP2P49792 3224 aaKnown RBP22.52■■□□□ 1.2
CPNE1-204ENST00000397443 TMEM86AQ8N2M4 240 aa22.52■■□□□ 1.2
CPNE1-204ENST00000397443 GPR62Q9BZJ7 368 aa22.52■■□□□ 1.2
CPNE1-204ENST00000397443 FAM124BQ9H5Z6 455 aaPredicted RBP22.52■■□□□ 1.2
CPNE1-204ENST00000397443 GABRDO14764 452 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 TRAPPC3O43617 180 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 GJB5O95377 273 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 VDRP11473 427 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 CCDC130P13994 396 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 LHX1P48742 406 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 VAV2P52735 878 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 PPP1R26Q5T8A7 1209 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-204ENST00000397443 FAM171A1Q5VUB5 890 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 HERVK_113Q902F9 699 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 DUSP10Q9Y6W6 482 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 MED7O43513 233 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 FTLP02792 175 aaPredicted RBP22.51■■□□□ 1.19
CPNE1-204ENST00000397443 CLEC16AQ2KHT3 1053 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 ARHGAP29Q52LW3 1261 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 KIAA0319Q5VV43 1072 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 OVOS1Q6IE37 1185 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 DENND1BQ6P3S1 775 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 LUC7LQ9NQ29 371 aaKnown RBP22.51■■□□□ 1.19
CPNE1-204ENST00000397443 NENFQ9UMX5 172 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 GUCA1BQ9UMX6 200 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 PCDHB8Q9UN66 801 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 NR2E3Q9Y5X4 410 aa22.51■■□□□ 1.19
CPNE1-204ENST00000397443 M0QYV0 167 aa22.5■■□□□ 1.19
CPNE1-204ENST00000397443 ATP2A2P16615 1042 aaKnown RBP22.5■■□□□ 1.19
CPNE1-204ENST00000397443 ADORA2BP29275 332 aa22.5■■□□□ 1.19
CPNE1-204ENST00000397443 C2CD6Q53TS8 623 aa22.5■■□□□ 1.19
CPNE1-204ENST00000397443 FUT10Q6P4F1 479 aa22.5■■□□□ 1.19
CPNE1-204ENST00000397443 KCNT2Q6UVM3 1135 aa22.5■■□□□ 1.19
CPNE1-204ENST00000397443 CMTR2Q8IYT2 770 aaKnown RBP22.5■■□□□ 1.19
CPNE1-204ENST00000397443 B3GALNT2Q8NCR0 500 aa22.5■■□□□ 1.19
CPNE1-204ENST00000397443 C1orf131Q8NDD1 294 aaKnown RBP22.5■■□□□ 1.19
CPNE1-204ENST00000397443 UBA3Q8TBC4 463 aa22.5■■□□□ 1.19
CPNE1-204ENST00000397443 TNIP3Q96KP6 325 aa22.5■■□□□ 1.19
CPNE1-204ENST00000397443 TSPAN16Q9UKR8 245 aa22.5■■□□□ 1.19
CPNE1-204ENST00000397443 DSEQ9UL01 958 aa22.5■■□□□ 1.19
CPNE1-204ENST00000397443 TSC2P49815 1807 aa22.5■■□□□ 1.19
CPNE1-204ENST00000397443 O00370 1275 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 CCP110O43303 1012 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 MICAL2O94851 1124 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 CYP11A1P05108 521 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 MAGEA10P43363 369 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-204ENST00000397443 GALCP54803 685 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 YWHAHQ04917 246 aaPredicted RBP22.49■■□□□ 1.19
CPNE1-204ENST00000397443 GOLGA7BQ2TAP0 167 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 MDH1BQ5I0G3 518 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 C9orf50Q5SZB4 431 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 RTP3Q9BQQ7 232 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 SYT15Q9BQS2 421 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.49■■□□□ 1.192e-6■■■■■ 55.4
CPNE1-204ENST00000397443 SF3B1O75533 1304 aaKnown RBP eCLIP22.49■■□□□ 1.192e-6■■■■■ 85.9
CPNE1-204ENST00000397443 H2AFZP0C0S5 128 aa22.49■■□□□ 1.19
CPNE1-204ENST00000397443 PTPN1P18031 435 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms