RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 ATAD1Q8NBU5 361 aa27.16■■□□□ 1.94
TSPAN4-207ENST00000397411 RHOBTB2Q9BYZ6 727 aa27.16■■□□□ 1.94
TSPAN4-207ENST00000397411 SLC27A5Q9Y2P5 690 aa27.16■■□□□ 1.94
TSPAN4-207ENST00000397411 INSL5Q9Y5Q6 135 aa27.16■■□□□ 1.94
TSPAN4-207ENST00000397411 C2orf16Q68DN1 1984 aa27.15■■□□□ 1.94
TSPAN4-207ENST00000397411 MTMR11A4FU01 709 aa27.15■■□□□ 1.94
TSPAN4-207ENST00000397411 DLL1O00548 723 aa27.15■■□□□ 1.94
TSPAN4-207ENST00000397411 WARSP23381 471 aaKnown RBP27.15■■□□□ 1.94
TSPAN4-207ENST00000397411 ALDH1A3P47895 512 aa27.15■■□□□ 1.94
TSPAN4-207ENST00000397411 NFE2Q16621 373 aaPredicted RBP27.15■■□□□ 1.94
TSPAN4-207ENST00000397411 GRASPQ7Z6J2 395 aaPredicted RBP27.15■■□□□ 1.94
TSPAN4-207ENST00000397411 FEZF2Q8TBJ5 459 aa27.15■■□□□ 1.94
TSPAN4-207ENST00000397411 C2orf15Q8WU43 125 aaKnown RBP27.15■■□□□ 1.94
TSPAN4-207ENST00000397411 ELMO3Q96BJ8 720 aa27.15■■□□□ 1.94
TSPAN4-207ENST00000397411 ZNF512Q96ME7 567 aaPredicted RBP27.15■■□□□ 1.94
TSPAN4-207ENST00000397411 VRTNQ9H8Y1 702 aa27.15■■□□□ 1.94
TSPAN4-207ENST00000397411 GABRDO14764 452 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 TACC1O75410 805 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 CCDC192P0DO97 292 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 TUFMP49411 452 aaKnown RBP27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 TWF1Q12792 350 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 PLD1Q13393 1074 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 CCDC183Q5T5S1 534 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 IQCEQ6IPM2 695 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 SCARA5Q6ZMJ2 495 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 LRRTM3Q86VH5 581 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 TAS1R2Q8TE23 839 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 ACSF2Q96CM8 615 aaPredicted RBP27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 SEPT5Q99719 369 aaPredicted RBP27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 MRPL45Q9BRJ2 306 aaKnown RBP27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 PI4K2AQ9BTU6 479 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 WDR6Q9NNW5 1121 aaKnown RBP27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 ABI2Q9NYB9 513 aaPredicted RBP27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 CDH9Q9ULB4 789 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 PCDHB5Q9Y5E4 795 aa27.14■■□□□ 1.94
TSPAN4-207ENST00000397411 PTPN2P17706 415 aa27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 EPHB3P54753 998 aa27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 MCCD1P59942 119 aaPredicted RBP27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 DPCR1Q3MIW9 517 aa27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 MGAT5BQ3V5L5 792 aa27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 WDR44Q5JSH3 913 aa27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 INTS6LQ5JSJ4 861 aaKnown RBP27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 LIMS2Q7Z4I7 341 aa27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 FBXL13Q8NEE6 735 aa27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 SPPL2BQ8TCT7 592 aa27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 KBTBD7Q8WVZ9 684 aa27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 SYT15Q9BQS2 421 aa27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 GTF3C4Q9UKN8 822 aa27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 CLUHO75153 1309 aa27.13■■□□□ 1.93
TSPAN4-207ENST00000397411 A8MXQ7 604 aa27.12■■□□□ 1.93
TSPAN4-207ENST00000397411 ASS1P00966 412 aaKnown RBP27.12■■□□□ 1.93
TSPAN4-207ENST00000397411 LMO2P25791 158 aa27.12■■□□□ 1.93
TSPAN4-207ENST00000397411 GBP2P32456 591 aaPredicted RBP27.12■■□□□ 1.93
TSPAN4-207ENST00000397411 CDH8P55286 799 aa27.12■■□□□ 1.93
TSPAN4-207ENST00000397411 SPOPLQ6IQ16 392 aa27.12■■□□□ 1.93
TSPAN4-207ENST00000397411 OTOP3Q7RTS5 596 aa27.12■■□□□ 1.93
TSPAN4-207ENST00000397411 SPATA2LQ8IUW3 424 aaPredicted RBP27.12■■□□□ 1.93
TSPAN4-207ENST00000397411 TDRD5Q8NAT2 981 aaKnown RBP27.12■■□□□ 1.93
TSPAN4-207ENST00000397411 FAM200AQ8TCP9 573 aa27.12■■□□□ 1.93
TSPAN4-207ENST00000397411 SMYD3Q9H7B4 428 aa27.12■■□□□ 1.93
TSPAN4-207ENST00000397411 YIPF1Q9Y548 306 aa27.12■■□□□ 1.93
TSPAN4-207ENST00000397411 C19orf67A6NJJ6 358 aa27.11■■□□□ 1.93
TSPAN4-207ENST00000397411 HCRTO43612 131 aa27.11■■□□□ 1.93
TSPAN4-207ENST00000397411 PAPLNO95428 1278 aa27.11■■□□□ 1.93
TSPAN4-207ENST00000397411 POU2F2P09086 479 aa27.11■■□□□ 1.93
TSPAN4-207ENST00000397411 FSHRP23945 695 aa27.11■■□□□ 1.93
TSPAN4-207ENST00000397411 ERCC5P28715 1186 aaPredicted RBP27.11■■□□□ 1.93
TSPAN4-207ENST00000397411 CETN1Q12798 172 aa27.11■■□□□ 1.93
TSPAN4-207ENST00000397411 MAPRE1Q15691 268 aaKnown RBP27.11■■□□□ 1.93
TSPAN4-207ENST00000397411 CORO1BQ9BR76 489 aa27.11■■□□□ 1.93
TSPAN4-207ENST00000397411 RAB20Q9NX57 234 aa27.11■■□□□ 1.93
TSPAN4-207ENST00000397411 HSFX1Q9UBD0 423 aa27.11■■□□□ 1.93
TSPAN4-207ENST00000397411 UNC80Q8N2C7 3258 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 LOC730098B7Z3J9 87 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 TNFRSF10AO00220 468 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 ATP2C2O75185 946 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 VNN2O95498 520 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 PTMSP20962 102 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 RAP1GAPP47736 663 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 PSMC1P62191 440 aaKnown RBP27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 NOP14P78316 857 aaKnown RBP27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 NTHL1P78549 312 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 PABPC1LQ4VXU2 614 aaKnown RBP27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 PLCD3Q8N3E9 789 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 SLC35C1Q96A29 364 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 TMLHEQ9NVH6 421 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 HCFC1R1Q9NWW0 138 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 DNMT3BQ9UBC3 853 aaKnown RBP27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 USTQ9Y2C2 406 aa27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.1■■□□□ 1.93
TSPAN4-207ENST00000397411 MYBPHLA2RUH7 354 aa27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 N4BP1O75113 896 aaKnown RBP27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 TRIM21P19474 475 aaKnown RBP27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 TAF12Q16514 161 aa27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 CBWD6Q4V339 395 aa27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 CT47A1Q5JQC4 288 aaPredicted RBP27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 CBWD3Q5JTY5 395 aa27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 CBWD5Q5RIA9 395 aa27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 CYP4A22Q5TCH4 519 aa27.09■■□□□ 1.93
TSPAN4-207ENST00000397411 C4orf50Q6ZRC1 276 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms