RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 OBP2AQ9NY56 170 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 KCND2Q9NZV8 630 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 HSFX1Q9UBD0 423 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 UBQLN1Q9UMX0 589 aaKnown RBP9.52□□□□□ -0.89
CAPN3-208ENST00000397204 YIPF1Q9Y548 306 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 PCDHB6Q9Y5E3 794 aa9.52□□□□□ -0.89
CAPN3-208ENST00000397204 TIMM13Q9Y5L4 95 aaPredicted RBP9.52□□□□□ -0.89
CAPN3-208ENST00000397204 SDK1Q7Z5N4 2213 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 A0A1W2PRU2 124 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 PP2D1A8MPX8 630 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 VNN2O95498 520 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 ADRB2P07550 413 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 HARSP12081 509 aaKnown RBP9.51□□□□□ -0.89
CAPN3-208ENST00000397204 TYMPP19971 482 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 CDC25AP30304 524 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 TUFMP49411 452 aaKnown RBP9.51□□□□□ -0.89
CAPN3-208ENST00000397204 SATB1Q01826 763 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 GAS6Q14393 721 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 IL17AQ16552 155 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 ARHGAP29Q52LW3 1261 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 SEZ6Q53EL9 994 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 HYIQ5T013 277 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 ARMCX5Q6P1M9 558 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 KCNK18Q7Z418 384 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 HAUS6Q7Z4H7 955 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 DNAJB7Q7Z6W7 309 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-208ENST00000397204 ITIH5Q86UX2 942 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 TMC8Q8IU68 726 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 TSC1Q92574 1164 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 PSMG2Q969U7 264 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 RSPRY1Q96DX4 576 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 SH2B1Q9NRF2 756 aaPredicted RBP9.51□□□□□ -0.89
CAPN3-208ENST00000397204 LARSQ9P2J5 1176 aaKnown RBP9.51□□□□□ -0.89
CAPN3-208ENST00000397204 ANKFY1Q9P2R3 1169 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 TUBGCP4Q9UGJ1 667 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 CFAP47Q6ZTR5 3102 aa9.51□□□□□ -0.89
CAPN3-208ENST00000397204 MAP1BP46821 2468 aaKnown RBP9.5□□□□□ -0.89
CAPN3-208ENST00000397204 TRIP11Q15643 1979 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 CACNA1GO43497 2377 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 LACTBL1A8MY62 500 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 CHURC1-FNTBB4DL54 471 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 SPECC1L-ADORA2AF8WAN1 911 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 K7ESF4 209 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 ADRB1P08588 477 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 CXCL8P10145 99 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 MATR3P43243 847 aaKnown RBP eCLIP9.5□□□□□ -0.89
CAPN3-208ENST00000397204 FNTBP49356 437 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 LILRA4P59901 499 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 PPP2R3AQ06190 1150 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 PTPAQ15257 358 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 LPAL2Q16609 132 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 ARHGAP15Q53QZ3 475 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 SPATA1Q5VX52 437 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 OVOS1Q6IE37 1185 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 PRR23BQ6ZRT6 265 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 CD302Q8IX05 232 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 ATAD1Q8NBU5 361 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 FAM200AQ8TCP9 573 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 DDX1Q92499 740 aaKnown RBP9.5□□□□□ -0.89
CAPN3-208ENST00000397204 LRRC3BQ96PB8 259 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 PGLYRP2Q96PD5 576 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 HAPLN2Q9GZV7 340 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 DNAJC25Q9H1X3 360 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 CRISPLD1Q9H336 500 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 ATXN3LQ9H3M9 355 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 SEMA4GQ9NTN9 838 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 THG1LQ9NWX6 298 aaKnown RBP9.5□□□□□ -0.89
CAPN3-208ENST00000397204 ZMYM5Q9UJ78 669 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.5□□□□□ -0.89
CAPN3-208ENST00000397204 COL4A3Q01955 1670 aa9.5□□□□□ -0.89
CAPN3-208ENST00000397204 CCDC163A0A0D9SF12 145 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-208ENST00000397204 SLC38A8A6NNN8 435 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 OGTO15294 1046 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 SLC26A4O43511 780 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 CYP11A1P05108 521 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 OR4Q2P0C623 313 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 PLA2G4BP0C869 781 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 GABRR2P28476 465 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 CTHP32929 405 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 ABCD1P33897 745 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 SLC12A3P55017 1021 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 NCKAP1LP55160 1127 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 SPAG1Q07617 926 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 RAD51AP2Q09MP3 1159 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 SMARCB1Q12824 385 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 ZRSR1Q15695 479 aaKnown RBP9.49□□□□□ -0.89
CAPN3-208ENST00000397204 ENOX2Q16206 610 aaKnown RBP9.49□□□□□ -0.89
CAPN3-208ENST00000397204 RILPL1Q5EBL4 403 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 GPR158Q5T848 1215 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 LYPD8Q6UX82 237 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 PRR23CQ6ZRP0 262 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 GAREM2Q75VX8 874 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 BICD1Q96G01 975 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 CDK5RAP3Q96JB5 506 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 LOXL4Q96JB6 756 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 SENP8Q96LD8 212 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 PNMA5Q96PV4 448 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 MKNK1Q9BUB5 465 aa9.49□□□□□ -0.89
CAPN3-208ENST00000397204 TASP1Q9H6P5 420 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms