RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 TSPAN18Q96SJ8 248 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 SETD4Q9NVD3 440 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 SIX4Q9UIU6 781 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 TANC1Q9C0D5 1861 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 LAMA3Q16787 3333 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 C17orf102A2RUQ5 167 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 SART1O43290 800 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 SPOPO43791 374 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 FGGP02679 453 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 CALB1P05937 261 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 GLI1P08151 1106 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 NFICP08651 508 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 MMP8P22894 467 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 RRM1P23921 792 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 AARSP49588 968 aaKnown RBP eCLIP15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 GABPB1Q06547 395 aaPredicted RBP15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 PPIGQ13427 754 aaKnown RBP eCLIP15.32■□□□□ 0.045e-8■□□□□ 11
RTFDC1-203ENST00000395881 TRIM71Q2Q1W2 868 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 TMEM35BQ8NCS4 154 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 CPA5Q8WXQ8 436 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 RUNDC3BQ96NL0 473 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 MED4Q9NPJ6 270 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 ADAM22Q9P0K1 906 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 ANAPC7Q9UJX3 599 aa15.32■□□□□ 0.04
RTFDC1-203ENST00000395881 MYO1FO00160 1098 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 PITPNM1O00562 1244 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 SOX1O00570 391 aaPredicted RBP15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 TREHO43280 583 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 ATMINO43313 823 aaPredicted RBP15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 RAD51CO43502 376 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 MED7O43513 233 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 GPR32O75388 356 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 ACRP10323 421 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 MAN1A1P33908 653 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 RWDD2BP57060 319 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 OSTNP61366 133 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 SLC7A5Q01650 507 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 TAP1Q03518 808 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 PTK7Q13308 1070 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 TMEM132DQ14C87 1099 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 SEL1L2Q5TEA6 688 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 JADE1Q6IE81 842 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 SLC27A1Q6PCB7 646 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 TMEM192Q8IY95 271 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 NME8Q8N427 588 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 SEC14L1Q92503 715 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 LHX5Q9H2C1 402 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 IL23AQ9NPF7 189 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 CEP83Q9Y592 693 aa15.31■□□□□ 0.04
RTFDC1-203ENST00000395881 MEFVO15553 781 aaPredicted RBP15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 ZMYND10O75800 440 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 PROSCO94903 275 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 MYBL2P10244 700 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 GNAT1P11488 350 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 DARSP14868 501 aaKnown RBP15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 RNASE9P60153 205 aaKnown RBP15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 RBP5P82980 135 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 GUCY2DQ02846 1103 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 BFSP2Q13515 415 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 DHX34Q14147 1143 aaKnown RBP15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 PTPROQ16827 1216 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 LRIT3Q3SXY7 679 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 TMEM240Q5SV17 173 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 NOTUMQ6P988 496 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 SERINC5Q86VE9 423 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 CDR2LQ86X02 465 aaPredicted RBP15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 KLHL7Q8IXQ5 586 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 MREGQ8N565 214 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 WHAMMQ8TF30 809 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 KRT35Q92764 455 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 CPB2Q96IY4 423 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 EPB41L5Q9HCM4 733 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 PARVAQ9NVD7 372 aa15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.3■□□□□ 0.04
RTFDC1-203ENST00000395881 FAM187AA6NFU0 413 aa15.29■□□□□ 0.04
RTFDC1-203ENST00000395881 HOXA11P31270 313 aaPredicted RBP15.29■□□□□ 0.04
RTFDC1-203ENST00000395881 MAMLD1Q13495 774 aa15.29■□□□□ 0.04
RTFDC1-203ENST00000395881 GPNMBQ14956 572 aa15.29■□□□□ 0.04
RTFDC1-203ENST00000395881 CYP1B1Q16678 543 aa15.29■□□□□ 0.04
RTFDC1-203ENST00000395881 TRAF7Q6Q0C0 670 aa15.29■□□□□ 0.04
RTFDC1-203ENST00000395881 ZNF365Q70YC5 407 aa15.29■□□□□ 0.04
RTFDC1-203ENST00000395881 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.29■□□□□ 0.04
RTFDC1-203ENST00000395881 AP1M1Q9BXS5 423 aa15.29■□□□□ 0.04
RTFDC1-203ENST00000395881 KIAA1257Q9ULG3 409 aa15.29■□□□□ 0.04
RTFDC1-203ENST00000395881 STRIP2Q9ULQ0 834 aa15.29■□□□□ 0.04
RTFDC1-203ENST00000395881 HPCAL4Q9UM19 191 aa15.29■□□□□ 0.04
RTFDC1-203ENST00000395881 TMEM110-MUSTN1A8MSY1 372 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 PSTPIP1O43586 416 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 CSDE1O75534 798 aaKnown RBP15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 ITGB3P05106 788 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 KRT19P08727 400 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 CKBP12277 381 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 CHRNA3P32297 505 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 TNNT3P45378 269 aaPredicted RBP15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 GSCP56915 257 aaPredicted RBP15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 KIZQ2M2Z5 673 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 WDR72Q3MJ13 1102 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 SCARA3Q6AZY7 606 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 CATSPER4Q7RTX7 472 aa15.28■□□□□ 0.04
RTFDC1-203ENST00000395881 MAIP1Q8WWC4 291 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms