RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ANO9A1A5B4 782 aa22.85■■□□□ 1.25
TRAF4-203ENST00000394925 PXNP49023 591 aaPredicted RBP22.85■■□□□ 1.25
TRAF4-203ENST00000394925 CCDC6Q16204 474 aa22.85■■□□□ 1.25
TRAF4-203ENST00000394925 AASDHQ4L235 1098 aaPredicted RBP22.85■■□□□ 1.25
TRAF4-203ENST00000394925 METTL23Q86XA0 190 aa22.85■■□□□ 1.25
TRAF4-203ENST00000394925 CHAMP1Q96JM3 812 aa22.85■■□□□ 1.25
TRAF4-203ENST00000394925 KIF2CQ99661 725 aa22.85■■□□□ 1.25
TRAF4-203ENST00000394925 ARRDC1-AS1Q9H2J1 176 aa22.85■■□□□ 1.25
TRAF4-203ENST00000394925 ZHX3Q9H4I2 956 aa22.85■■□□□ 1.25
TRAF4-203ENST00000394925 PARVGQ9HBI0 331 aa22.85■■□□□ 1.25
TRAF4-203ENST00000394925 DSEQ9UL01 958 aa22.85■■□□□ 1.25
TRAF4-203ENST00000394925 CYB561D2O14569 222 aa22.84■■□□□ 1.25
TRAF4-203ENST00000394925 TRAK2O60296 914 aa22.84■■□□□ 1.25
TRAF4-203ENST00000394925 ACOT2P49753 483 aa22.84■■□□□ 1.25
TRAF4-203ENST00000394925 PTPAQ15257 358 aa22.84■■□□□ 1.25
TRAF4-203ENST00000394925 SF3A2Q15428 464 aaKnown RBP22.84■■□□□ 1.25
TRAF4-203ENST00000394925 ARL6IP4Q66PJ3 421 aaKnown RBP22.84■■□□□ 1.25
TRAF4-203ENST00000394925 IL31Q6EBC2 164 aa22.84■■□□□ 1.25
TRAF4-203ENST00000394925 CMTM8Q8IZV2 173 aa22.84■■□□□ 1.25
TRAF4-203ENST00000394925 THEM5Q8N1Q8 247 aa22.84■■□□□ 1.25
TRAF4-203ENST00000394925 LRRC15Q8TF66 581 aa22.84■■□□□ 1.25
TRAF4-203ENST00000394925 PYM1Q9BRP8 204 aaKnown RBP22.84■■□□□ 1.25
TRAF4-203ENST00000394925 DERAQ9Y315 318 aa22.84■■□□□ 1.25
TRAF4-203ENST00000394925 KIF3AQ9Y496 699 aa22.84■■□□□ 1.25
TRAF4-203ENST00000394925 USP24Q9UPU5 2620 aa22.83■■□□□ 1.25
TRAF4-203ENST00000394925 DENND4CQ5VZ89 1909 aa22.83■■□□□ 1.25
TRAF4-203ENST00000394925 ANKRD63C9JTQ0 380 aa22.83■■□□□ 1.25
TRAF4-203ENST00000394925 SCP2P22307 547 aa22.83■■□□□ 1.25
TRAF4-203ENST00000394925 ZNF131P52739 623 aa22.83■■□□□ 1.25
TRAF4-203ENST00000394925 LRRTM3Q86VH5 581 aa22.83■■□□□ 1.25
TRAF4-203ENST00000394925 GAB3Q8WWW8 586 aa22.83■■□□□ 1.25
TRAF4-203ENST00000394925 DDX1Q92499 740 aaKnown RBP22.83■■□□□ 1.25
TRAF4-203ENST00000394925 CALML4Q96GE6 196 aa22.83■■□□□ 1.25
TRAF4-203ENST00000394925 ABI2Q9NYB9 513 aaPredicted RBP22.83■■□□□ 1.25
TRAF4-203ENST00000394925 CCL26Q9Y258 94 aa22.83■■□□□ 1.25
TRAF4-203ENST00000394925 RPP40O75818 363 aaKnown RBP22.82■■□□□ 1.24
TRAF4-203ENST00000394925 KRT18P05783 430 aaKnown RBP22.82■■□□□ 1.24
TRAF4-203ENST00000394925 HAPLN1P10915 354 aaPredicted RBP22.82■■□□□ 1.24
TRAF4-203ENST00000394925 NMT1P30419 496 aaKnown RBP22.82■■□□□ 1.24
TRAF4-203ENST00000394925 TAF6P49848 677 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 GRSF1Q12849 480 aaKnown RBP eCLIP22.82■■□□□ 1.24
TRAF4-203ENST00000394925 RUNX3Q13761 415 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 MCM6Q14566 821 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 TMEM196Q5HYL7 178 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 WSCD1Q658N2 575 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 TRIM68Q6AZZ1 485 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 FSTL4Q6MZW2 842 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 CACNA2D4Q7Z3S7 1137 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 KBTBD6Q86V97 674 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 MAB21L3Q8N8X9 362 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 C12orf50Q8NA57 414 aaPredicted RBP22.82■■□□□ 1.24
TRAF4-203ENST00000394925 SPPL2BQ8TCT7 592 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 C2orf15Q8WU43 125 aaKnown RBP22.82■■□□□ 1.24
TRAF4-203ENST00000394925 FAM83CQ9BQN1 747 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 EBF3Q9H4W6 596 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 ASB7Q9H672 318 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 HPS4Q9NQG7 708 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 DPP3Q9NY33 737 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 SLC8A2Q9UPR5 921 aa22.82■■□□□ 1.24
TRAF4-203ENST00000394925 TISP43B9A030 160 aa22.81■■□□□ 1.24
TRAF4-203ENST00000394925 CCDC192P0DO97 292 aa22.81■■□□□ 1.24
TRAF4-203ENST00000394925 AVPR1AP37288 418 aa22.81■■□□□ 1.24
TRAF4-203ENST00000394925 UBA7P41226 1012 aa22.81■■□□□ 1.24
TRAF4-203ENST00000394925 BFSP1Q12934 665 aa22.81■■□□□ 1.24
TRAF4-203ENST00000394925 ADALQ6DHV7 355 aa22.81■■□□□ 1.24
TRAF4-203ENST00000394925 TMEM150AQ86TG1 271 aa22.81■■□□□ 1.24
TRAF4-203ENST00000394925 LOXL4Q96JB6 756 aa22.81■■□□□ 1.24
TRAF4-203ENST00000394925 AK8Q96MA6 479 aa22.81■■□□□ 1.24
TRAF4-203ENST00000394925 FIZ1Q96SL8 496 aa22.81■■□□□ 1.24
TRAF4-203ENST00000394925 BLOC1S4Q9NUP1 217 aa22.81■■□□□ 1.24
TRAF4-203ENST00000394925 OTOL1A6NHN0 477 aaPredicted RBP22.8■■□□□ 1.24
TRAF4-203ENST00000394925 SLC26A4O43511 780 aa22.8■■□□□ 1.24
TRAF4-203ENST00000394925 F11P03951 625 aa22.8■■□□□ 1.24
TRAF4-203ENST00000394925 ZNF806P0C7X5 589 aa22.8■■□□□ 1.24
TRAF4-203ENST00000394925 NLRP12P59046 1061 aa22.8■■□□□ 1.24
TRAF4-203ENST00000394925 GTF2BQ00403 316 aa22.8■■□□□ 1.24
TRAF4-203ENST00000394925 SMARCB1Q12824 385 aa22.8■■□□□ 1.24
TRAF4-203ENST00000394925 ZC2HC1CQ53FD0 456 aaPredicted RBP22.8■■□□□ 1.24
TRAF4-203ENST00000394925 USP13Q92995 863 aaPredicted RBP22.8■■□□□ 1.24
TRAF4-203ENST00000394925 RXFP3Q9NSD7 469 aa22.8■■□□□ 1.24
TRAF4-203ENST00000394925 ZMYM5Q9UJ78 669 aa22.8■■□□□ 1.24
TRAF4-203ENST00000394925 AGO2Q9UKV8 859 aaKnown RBP22.8■■□□□ 1.24
TRAF4-203ENST00000394925 C2CD2Q9Y426 696 aa22.8■■□□□ 1.24
TRAF4-203ENST00000394925 CCDC163A0A0D9SF12 145 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 H3BQV1 296 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 TRDMT1O14717 391 aaKnown RBP22.79■■□□□ 1.24
TRAF4-203ENST00000394925 ATG13O75143 517 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 TBCAO75347 108 aaKnown RBP22.79■■□□□ 1.24
TRAF4-203ENST00000394925 EPN2O95208 641 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 HMGA1P17096 107 aaKnown RBP22.79■■□□□ 1.24
TRAF4-203ENST00000394925 PLCG1P19174 1290 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 RAP1GAPP47736 663 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 LIMK1P53667 647 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 TXNDC8Q6A555 127 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 DCP1BQ8IZD4 617 aaKnown RBP22.79■■□□□ 1.24
TRAF4-203ENST00000394925 STKLD1Q8NE28 680 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 RASSF8Q8NHQ8 419 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 CHFRQ96EP1 664 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 TDP1Q9NUW8 608 aa22.79■■□□□ 1.24
TRAF4-203ENST00000394925 POLR3BQ9NW08 1133 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms