RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 MRPL47Q9HD33 250 aaKnown RBP19■□□□□ 0.63
CLDND1-204ENST00000394185 ST3GAL5Q9UNP4 418 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 USTQ9Y2C2 406 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 MKI67P46013 3256 aaKnown RBP19■□□□□ 0.63
CLDND1-204ENST00000394185 TTI1O43156 1089 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 ATP8B1O43520 1251 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 IGFBP6P24592 240 aaPredicted RBP19■□□□□ 0.63
CLDND1-204ENST00000394185 AFF1P51825 1210 aaKnown RBP19■□□□□ 0.63
CLDND1-204ENST00000394185 RWDD2BP57060 319 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 NKX3-2P78367 333 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 UBA3Q8TBC4 463 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 HERPUD2Q9BSE4 406 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 ZNF518BQ9C0D4 1074 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 SENP6Q9GZR1 1112 aaPredicted RBP19■□□□□ 0.63
CLDND1-204ENST00000394185 CACNG4Q9UBN1 327 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 SRRDQ9UH36 339 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 NFU1Q9UMS0 254 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 WDR3Q9UNX4 943 aaKnown RBP eCLIP19■□□□□ 0.63
CLDND1-204ENST00000394185 TRPV2Q9Y5S1 764 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 SCINQ9Y6U3 715 aa19■□□□□ 0.63
CLDND1-204ENST00000394185 TMEM191CA6NGB0 347 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 CCDC188H7C350 402 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 CALB1P05937 261 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 DDX42Q86XP3 938 aaKnown RBP eCLIP18.99■□□□□ 0.63
CLDND1-204ENST00000394185 KRT222Q8N1A0 295 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 LHX5Q9H2C1 402 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 AGO3Q9H9G7 860 aaKnown RBP18.99■□□□□ 0.63
CLDND1-204ENST00000394185 CEP83Q9Y592 693 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 CASP8AP2Q9UKL3 1982 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 GOLGA8SH3BPF8 625 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 M0QYV0 167 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 MED7O43513 233 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 RPS6KA5O75582 802 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 ERBB2P04626 1255 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 HTRA3P83110 453 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 XKR4Q5GH76 650 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 PPP1R15BQ5SWA1 713 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 ZNF618Q5T7W0 954 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 SEL1L2Q5TEA6 688 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 DNAJC24Q6P3W2 148 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 PRELID2Q8N945 189 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 DDX27Q96GQ7 796 aaKnown RBP18.99■□□□□ 0.63
CLDND1-204ENST00000394185 CREBZFQ9NS37 354 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 UBQLN1Q9UMX0 589 aaKnown RBP18.99■□□□□ 0.63
CLDND1-204ENST00000394185 THSD7BQ9C0I4 1608 aa18.99■□□□□ 0.63
CLDND1-204ENST00000394185 M0QZ92 97 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 PIK3R2O00459 728 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 PTGESO14684 152 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 FAM153BP0C7A2 387 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 GJC1P36383 396 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 SOWAHAQ2M3V2 549 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 FAM153CQ494X1 144 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 MAP9Q49MG5 647 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 C18orf8Q96DM3 657 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 TRMT13Q9NUP7 481 aaKnown RBP18.98■□□□□ 0.63
CLDND1-204ENST00000394185 FAM153AQ9UHL3 310 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 F8VP50 259 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 PIRO00625 290 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 THPOP40225 353 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 SLC1A1P43005 524 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 GPD2P43304 727 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 MGAT3Q09327 533 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 PTGISQ16647 500 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 ANKS1BQ7Z6G8 1248 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 ACOT1Q86TX2 421 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 SLC13A5Q86YT5 568 aaPredicted RBP18.98■□□□□ 0.63
CLDND1-204ENST00000394185 IFT20Q8IY31 132 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 RUBCNQ92622 972 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 LPPQ93052 612 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 TRIM51Q9BSJ1 452 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 NT5C1AQ9BXI3 368 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 DPEP3Q9H4B8 488 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 KLHL11Q9NVR0 708 aa18.98■□□□□ 0.63
CLDND1-204ENST00000394185 KCNE1P15382 129 aa18.97■□□□□ 0.63
CLDND1-204ENST00000394185 TNFRSF8P28908 595 aa18.97■□□□□ 0.63
CLDND1-204ENST00000394185 SSR1P43307 286 aaKnown RBP18.97■□□□□ 0.63
CLDND1-204ENST00000394185 SIX1Q15475 284 aaPredicted RBP18.97■□□□□ 0.63
CLDND1-204ENST00000394185 ATP13A4Q4VNC1 1196 aa18.97■□□□□ 0.63
CLDND1-204ENST00000394185 SGO2Q562F6 1265 aa18.97■□□□□ 0.63
CLDND1-204ENST00000394185 PPP1R2P3Q6NXS1 205 aa18.97■□□□□ 0.63
CLDND1-204ENST00000394185 TTC27Q6P3X3 843 aa18.97■□□□□ 0.63
CLDND1-204ENST00000394185 DCUN1D2Q6PH85 259 aa18.97■□□□□ 0.63
CLDND1-204ENST00000394185 SND1Q7KZF4 910 aaKnown RBP eCLIP18.97■□□□□ 0.63
CLDND1-204ENST00000394185 LRRC52Q8N7C0 313 aa18.97■□□□□ 0.63
CLDND1-204ENST00000394185 C3orf20Q8ND61 904 aa18.97■□□□□ 0.63
CLDND1-204ENST00000394185 JOSD2Q8TAC2 188 aa18.97■□□□□ 0.63
CLDND1-204ENST00000394185 NAP1L3Q99457 506 aaPredicted RBP18.97■□□□□ 0.63
CLDND1-204ENST00000394185 FAM49BQ9NUQ9 324 aa18.97■□□□□ 0.63
CLDND1-204ENST00000394185 TSPAN16Q9UKR8 245 aa18.97■□□□□ 0.63
CLDND1-204ENST00000394185 PDCD11Q14690 1871 aaKnown RBP18.97■□□□□ 0.63
CLDND1-204ENST00000394185 TULP2O00295 520 aa18.96■□□□□ 0.63
CLDND1-204ENST00000394185 HMGCRP04035 888 aa18.96■□□□□ 0.63
CLDND1-204ENST00000394185 FGFR1P11362 822 aa18.96■□□□□ 0.63
CLDND1-204ENST00000394185 VDRP11473 427 aa18.96■□□□□ 0.63
CLDND1-204ENST00000394185 RFC1P35251 1148 aaPredicted RBP18.96■□□□□ 0.63
CLDND1-204ENST00000394185 PDCLQ13371 301 aa18.96■□□□□ 0.63
CLDND1-204ENST00000394185 CNGA2Q16280 664 aa18.96■□□□□ 0.63
CLDND1-204ENST00000394185 FBXO47Q5MNV8 452 aa18.96■□□□□ 0.63
CLDND1-204ENST00000394185 PPP1R26Q5T8A7 1209 aaPredicted RBP18.96■□□□□ 0.63
CLDND1-204ENST00000394185 MAP3K21Q5TCX8 1036 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms