RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 DUSP4Q13115 394 aa20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 DPCR1Q3MIW9 517 aa20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 TAS1R2Q8TE23 839 aa20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 C2orf15Q8WU43 125 aaKnown RBP20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 KBTBD7Q8WVZ9 684 aa20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 POMKQ9H5K3 350 aa20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 POLIQ9UNA4 740 aa20.34■□□□□ 0.85
PDLIM7-204ENST00000393546 MTMR11A4FU01 709 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 POU2F2P09086 479 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 PDGFRBP09619 1106 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 CCDC192P0DO97 292 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 ACAT1P24752 427 aaKnown RBP20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 NFE2Q16621 373 aaPredicted RBP20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 LRRTM3Q86VH5 581 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 ATAD1Q8NBU5 361 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 FBXL13Q8NEE6 735 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 OR6B3Q8NGW1 331 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 FEZF2Q8TBJ5 459 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 SLC35C1Q96A29 364 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 MRPL45Q9BRJ2 306 aaKnown RBP20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 HSFX1Q9UBD0 423 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 CDH9Q9ULB4 789 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 INSL5Q9Y5Q6 135 aa20.33■□□□□ 0.85
PDLIM7-204ENST00000393546 VNN2O95498 520 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 LMO2P25791 158 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 TUFMP49411 452 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 MARSP56192 900 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 ZP2Q05996 745 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 INTS6LQ5JSJ4 861 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 ELMOD1Q8N336 334 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 SPPL2BQ8TCT7 592 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 ELMO3Q96BJ8 720 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 RPGRIP1Q96KN7 1286 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 NECAB3Q96P71 396 aaPredicted RBP20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 MED15Q96RN5 788 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 PI4K2AQ9BTU6 479 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 WDR6Q9NNW5 1121 aaKnown RBP20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 RAB20Q9NX57 234 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 SLC27A5Q9Y2P5 690 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 NR2E1Q9Y466 385 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 PCDHB5Q9Y5E4 795 aa20.32■□□□□ 0.84
PDLIM7-204ENST00000393546 A0A0C4DFX4 3053 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 SSTR3P32745 418 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 ALDH1A3P47895 512 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 CDH8P55286 799 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 TWF1Q12792 350 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 PLD1Q13393 1074 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 CBWD6Q4V339 395 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 WDR44Q5JSH3 913 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 CBWD3Q5JTY5 395 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 CBWD5Q5RIA9 395 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 SPOPLQ6IQ16 392 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 SCARA5Q6ZMJ2 495 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 GRASPQ7Z6J2 395 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 CREBRFQ8IUR6 639 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 TRIM59Q8IWR1 403 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 GJD3Q8N144 294 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 ZNF512Q96ME7 567 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 SYT15Q9BQS2 421 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 COL25A1Q9BXS0 654 aaPredicted RBP20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 SMYD3Q9H7B4 428 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.31■□□□□ 0.846e-7■■■■■ 67.2
PDLIM7-204ENST00000393546 ANO10Q9NW15 660 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 TMEM63CQ9P1W3 806 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 GTF3C4Q9UKN8 822 aa20.31■□□□□ 0.84
PDLIM7-204ENST00000393546 C2orf16Q68DN1 1984 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 C19orf67A6NJJ6 358 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 A8MXQ7 604 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 HCRTO43612 131 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 N4BP1O75113 896 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 PTPN2P17706 415 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 FMO5P49326 533 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 EPHB3P54753 998 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 NOP14P78316 857 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 CETN1Q12798 172 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 MAPRE1Q15691 268 aaKnown RBP20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 SEMA4DQ92854 862 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 CRISPLD1Q9H336 500 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 TMLHEQ9NVH6 421 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 ABI2Q9NYB9 513 aaPredicted RBP20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 COQ4Q9Y3A0 265 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 YIPF1Q9Y548 306 aa20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.3■□□□□ 0.84
PDLIM7-204ENST00000393546 CLUHO75153 1309 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 MYBPHLA2RUH7 354 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 LOC730098B7Z3J9 87 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 PMM2O15305 246 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 ATP2C2O75185 946 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 RAP1GAPP47736 663 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 CDR1P51861 262 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 KCNH2Q12809 1159 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 MGAT5BQ3V5L5 792 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 IQCEQ6IPM2 695 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 CAVIN1Q6NZI2 390 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 FAM171BQ6P995 826 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 C4orf50Q6ZRC1 276 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 OTOP3Q7RTS5 596 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 SPATA2LQ8IUW3 424 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 ACSF2Q96CM8 615 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 FAXDC2Q96IV6 333 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms