RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 ILDR2Q71H61 639 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 POLNQ7Z5Q5 900 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 KIAA0319LQ8IZA0 1049 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 SLC4A11Q8NBS3 891 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 BCAS4Q8TDM0 211 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 SLITRK1Q96PX8 696 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 HEMGNQ9BXL5 484 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 SDCBP2Q9H190 292 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 EPN3Q9H201 632 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 ASIC3Q9UHC3 531 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 ITGA11Q9UKX5 1188 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 NOVA2Q9UNW9 492 aaKnown RBP15.12■□□□□ 0.01
MKS1-203ENST00000393120 ZSWIM8A7E2V4 1837 aa15.12■□□□□ 0.01
MKS1-203ENST00000393120 RRN3P2A6NIE6 340 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 F8VP50 259 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 RIPK2O43353 540 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 TJP3O95049 919 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 VTNP04004 478 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 SHBGP04278 402 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 MMP3P08254 477 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 SSR1P43307 286 aaKnown RBP15.11■□□□□ 0.01
MKS1-203ENST00000393120 PPP2R2AP63151 447 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 ADCY2Q08462 1091 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 ACVR2BQ13705 512 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 ZNF268Q14587 947 aaPredicted RBP15.11■□□□□ 0.01
MKS1-203ENST00000393120 TMEM132DQ14C87 1099 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 LLGL1Q15334 1064 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 GRIK4Q16099 956 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 DGKDQ16760 1214 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 FAM110CQ1W6H9 321 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 PTPN20Q4JDL3 420 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 C6orf118Q5T5N4 469 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 ANKS1BQ7Z6G8 1248 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 PLEKHH3Q7Z736 793 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 CCDC89Q8N998 374 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 NLRP7Q8WX94 980 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 TMEM176AQ96HP8 235 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 CPB2Q96IY4 423 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 SCLT1Q96NL6 688 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 PARK7Q99497 189 aaKnown RBP15.11■□□□□ 0.01
MKS1-203ENST00000393120 TINF2Q9BSI4 451 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 TRAIPQ9BWF2 469 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 EFR3BQ9Y2G0 817 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 ANK1P16157 1881 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 SLC15A5A6NIM6 579 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 CSDE1O75534 798 aaKnown RBP15.11■□□□□ 0.01
MKS1-203ENST00000393120 ATF2P15336 505 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 CD19P15391 556 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 GRM5P41594 1212 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 RBP5P82980 135 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 GUCY1A3Q02108 690 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 PTPN11Q06124 597 aaPredicted RBP15.11■□□□□ 0.01
MKS1-203ENST00000393120 CNGA2Q16280 664 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 MAP1SQ66K74 1059 aaPredicted RBP15.11■□□□□ 0.01
MKS1-203ENST00000393120 CCHCR1Q8TD31 782 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 HPDLQ96IR7 371 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 ACAP3Q96P50 834 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 ADPGKQ9BRR6 497 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 FOXP3Q9BZS1 431 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 ROPN1BQ9BZX4 212 aaPredicted RBP15.11■□□□□ 0.01
MKS1-203ENST00000393120 CNOT10Q9H9A5 744 aaKnown RBP15.11■□□□□ 0.01
MKS1-203ENST00000393120 ZNF408Q9H9D4 720 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 ROPN1Q9HAT0 212 aaPredicted RBP15.11■□□□□ 0.01
MKS1-203ENST00000393120 AAASQ9NRG9 546 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 KIAA1257Q9ULG3 409 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 DRG1Q9Y295 367 aaKnown RBP15.11■□□□□ 0.01
MKS1-203ENST00000393120 PLXNA1Q9UIW2 1896 aa15.11■□□□□ 0.01
MKS1-203ENST00000393120 PLXNB2O15031 1838 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 HMGCRP04035 888 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 VDRP11473 427 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 KRT3P12035 628 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 HPDP32754 393 aaPredicted RBP15.1■□□□□ 0.01
MKS1-203ENST00000393120 RAP1GAPP47736 663 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 GABRB2P47870 512 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 CDH8P55286 799 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 MAGOHP61326 146 aaKnown RBP15.1■□□□□ 0.01
MKS1-203ENST00000393120 INCA1Q0VD86 236 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 PCBP1Q15365 356 aaKnown RBP eCLIP15.1■□□□□ 0.01
MKS1-203ENST00000393120 PTGISQ16647 500 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 DCAF4L1Q3SXM0 396 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 ODF2Q5BJF6 829 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 SPRYD7Q5W111 196 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 TTC19Q6DKK2 380 aaPredicted RBP15.1■□□□□ 0.01
MKS1-203ENST00000393120 SPOCD1Q6ZMY3 1216 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 APBB1IPQ7Z5R6 666 aaPredicted RBP15.1■□□□□ 0.01
MKS1-203ENST00000393120 RELL1Q8IUW5 271 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 OR6J1Q8NGC5 347 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 ELOVL4Q9GZR5 314 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 SMYD3Q9H7B4 428 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 PLEKHA5Q9HAU0 1116 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 BCCIPQ9P287 314 aaKnown RBP eCLIP15.1■□□□□ 0.01
MKS1-203ENST00000393120 CYTH4Q9UIA0 394 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 DERAQ9Y315 318 aa15.1■□□□□ 0.01
MKS1-203ENST00000393120 LIASO43766 372 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 CAND2O75155 1236 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 KRT1P04264 644 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 TCF4P15884 667 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 KLRC2P26717 231 aa15.09■□□□□ 0.01
MKS1-203ENST00000393120 ADCY8P40145 1251 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms