RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 CTNNAL1Q9UBT7 734 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 SCOCQ9UIL1 159 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 ECM29Q5VYK3 1845 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 CDH16O75309 829 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 ITGB3P05106 788 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 CHRNB2P17787 502 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 PSMD6Q15008 389 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 EXOC8Q8IYI6 725 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 FIZ1Q96SL8 496 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 TMEM121Q9BTD3 319 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 SPATC1LQ9H0A9 340 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 C10orf88Q9H8K7 445 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 NUB1Q9Y5A7 615 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 A6NJR5 290 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 KRT7P08729 469 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 ZSCAN5DPP0CG00 497 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 CXCL8P10145 99 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 SCTRP47872 440 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 ALDH5A1P51649 535 aaPredicted RBP11.09□□□□□ -0.63
CALD1-203ENST00000393118 RPL7AP62424 266 aaKnown RBP11.09□□□□□ -0.63
CALD1-203ENST00000393118 CCNA1P78396 465 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 ACCSLQ4AC99 568 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 TTC27Q6P3X3 843 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 APBB1IPQ7Z5R6 666 aaPredicted RBP11.09□□□□□ -0.63
CALD1-203ENST00000393118 NME8Q8N427 588 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 PAF1Q8N7H5 531 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 KIF12Q96FN5 646 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 RHBDL2Q9NX52 303 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 SPDYE16A6NNV3 312 aaPredicted RBP11.08□□□□□ -0.64
CALD1-203ENST00000393118 F8VP50 259 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 ZBED1O96006 694 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 MT-ND3P03897 115 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 TROVE2P10155 538 aaKnown RBP eCLIP11.08□□□□□ -0.64
CALD1-203ENST00000393118 ARL4CP56559 192 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 IRX4P78413 519 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 LAMTOR4Q0VGL1 99 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 TMED1Q13445 227 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 HIF1AQ16665 826 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 ZACNQ401N2 412 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 ANKRD20A3Q5VUR7 823 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 CATSPERGQ6ZRH7 1159 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 C12orf56Q8IXR9 622 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 SAMD3Q8N6K7 520 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 RNF34Q969K3 372 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 FAF2Q96CS3 445 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 XPNPEP1Q9NQW7 623 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 METTL5Q9NRN9 209 aaKnown RBP11.08□□□□□ -0.64
CALD1-203ENST00000393118 FAM49BQ9NUQ9 324 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 EME2A4GXA9 379 aaPredicted RBP11.08□□□□□ -0.64
CALD1-203ENST00000393118 ADM5C9JUS6 153 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 CYP1A2P05177 515 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 KCNA2P16389 499 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 DRP2Q13474 957 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 MFSD7Q6UXD7 560 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 CD302Q8IX05 232 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 COPS5Q92905 334 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 DCLK3Q9C098 648 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 PORCNQ9H237 461 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 SAE1Q9UBE0 346 aaPredicted RBP11.08□□□□□ -0.64
CALD1-203ENST00000393118 TELO2Q9Y4R8 837 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 UMODL1Q5DID0 1318 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 ADGRA3Q8IWK6 1321 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 ADCY3O60266 1144 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 AP3M2P53677 418 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 EIF3EP60228 445 aaKnown RBP11.08□□□□□ -0.64
CALD1-203ENST00000393118 MED10Q9BTT4 135 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 DCTN4Q9UJW0 460 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 NOCTQ9UK39 431 aaKnown RBP11.08□□□□□ -0.64
CALD1-203ENST00000393118 STXBP5LQ9Y2K9 1186 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 SNX9Q9Y5X1 595 aa11.08□□□□□ -0.64
CALD1-203ENST00000393118 MYH7BA7E2Y1 1941 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 CAPN9O14815 690 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 PDGFRAP16234 1089 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 IFRD2Q12894 506 aaPredicted RBP11.07□□□□□ -0.64
CALD1-203ENST00000393118 VGLL4Q14135 290 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 FAM47CQ5HY64 1035 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 MOB2Q70IA6 237 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 ZNF354CQ86Y25 554 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 CCNYQ8ND76 341 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 TTC17Q96AE7 1141 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 MFSD14AQ96MC6 490 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 SMARCAD1Q9H4L7 1026 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.07□□□□□ -0.642e-6■□□□□ 8.8
CALD1-203ENST00000393118 POLIQ9UNA4 740 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 COL22A1Q8NFW1 1626 aaPredicted RBP11.07□□□□□ -0.64
CALD1-203ENST00000393118 PPFIA2O75334 1257 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 SNX16P57768 344 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 SPARCL1Q14515 664 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 C3orf20Q8ND61 904 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 TRABDQ9H4I3 376 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 RNF19AQ9NV58 838 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 DNPEPQ9ULA0 475 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 FOXO6A8MYZ6 492 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 OPHN1O60890 802 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 PIAS1O75925 651 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 VTNP04004 478 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 CHKAP35790 457 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 RAD23BP54727 409 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 TAS2R40P59535 323 aa11.07□□□□□ -0.64
CALD1-203ENST00000393118 CAPSQ13938 189 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms