RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 KBTBD7Q8WVZ9 684 aa16.1■□□□□ 0.17
IGHV3-53-201ENST00000390627 PGLYRP2Q96PD5 576 aa16.1■□□□□ 0.17
IGHV3-53-201ENST00000390627 TMEM209Q96SK2 561 aa16.1■□□□□ 0.17
IGHV3-53-201ENST00000390627 SNX25Q9H3E2 840 aa16.1■□□□□ 0.17
IGHV3-53-201ENST00000390627 POLIQ9UNA4 740 aa16.1■□□□□ 0.17
IGHV3-53-201ENST00000390627 UNC80Q8N2C7 3258 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 MTMR11A4FU01 709 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 NFE2Q16621 373 aaPredicted RBP16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 CBWD6Q4V339 395 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 CBWD3Q5JTY5 395 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 CBWD5Q5RIA9 395 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 SCARA5Q6ZMJ2 495 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 FAM114A1Q8IWE2 563 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 TRIM59Q8IWR1 403 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 OR6B3Q8NGW1 331 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 SPPL2BQ8TCT7 592 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 ADAMTS19Q8TE59 1207 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 ZNF707Q96C28 371 aaPredicted RBP16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 CNOT6LQ96LI5 555 aaKnown RBP16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 MED15Q96RN5 788 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 PI4K2AQ9BTU6 479 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 PHF7Q9BWX1 381 aaPredicted RBP16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 THAP9Q9H5L6 903 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 SMYD3Q9H7B4 428 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 RAB20Q9NX57 234 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 HSFX1Q9UBD0 423 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 CDH9Q9ULB4 789 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 INSL5Q9Y5Q6 135 aa16.09■□□□□ 0.17
IGHV3-53-201ENST00000390627 PMM2O15305 246 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 P4HA2O15460 535 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 CCL16O15467 120 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 SEC24AO95486 1093 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 WEE2P0C1S8 567 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 ACAT1P24752 427 aaKnown RBP16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 GNL1P36915 607 aaPredicted RBP16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 FMO5P49326 533 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 CETN1Q12798 172 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 DUSP4Q13115 394 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 PLD1Q13393 1074 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 MAPRE1Q15691 268 aaKnown RBP16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 WDR44Q5JSH3 913 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 SPOPLQ6IQ16 392 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 ADHFE1Q8IWW8 467 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 ELMOD1Q8N336 334 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 FAXDC2Q96IV6 333 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 UHRF1Q96T88 793 aaPredicted RBP16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 SYT15Q9BQS2 421 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 MRPL45Q9BRJ2 306 aaKnown RBP16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 NIF3L1Q9GZT8 377 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 POMKQ9H5K3 350 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 MAGEC2Q9UBF1 373 aaPredicted RBP16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 CDH22Q9UJ99 828 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 COQ4Q9Y3A0 265 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 YIPF1Q9Y548 306 aa16.08■□□□□ 0.16
IGHV3-53-201ENST00000390627 A8MXQ7 604 aa16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 VNN2O95498 520 aa16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 ASPAP45381 313 aa16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 TUFMP49411 452 aaKnown RBP16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 LRRTM3Q86VH5 581 aa16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 CREBRFQ8IUR6 639 aa16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 ATAD1Q8NBU5 361 aa16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 CYP3A43Q9HB55 503 aa16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 WDR6Q9NNW5 1121 aaKnown RBP16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 ABI2Q9NYB9 513 aaPredicted RBP16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 PCDHB5Q9Y5E4 795 aa16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 TCF20Q9UGU0 1960 aaKnown RBP16.07■□□□□ 0.16
IGHV3-53-201ENST00000390627 CLUHO75153 1309 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 HCRTO43612 131 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 LETM1O95202 739 aaPredicted RBP16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 AFPP02771 609 aaKnown RBP16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 PDGFRBP09619 1106 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 TRIM21P19474 475 aaKnown RBP16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 LMO2P25791 158 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 MTIF2P46199 727 aaKnown RBP16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 RAP1GAPP47736 663 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 ALDH1A3P47895 512 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 ZP2Q05996 745 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 TYRO3Q06418 890 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 TWF1Q12792 350 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 KCNH2Q12809 1159 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 SKOR2Q2VWA4 1001 aaPredicted RBP16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 MGAT5BQ3V5L5 792 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 C4orf50Q6ZRC1 276 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 ENOX1Q8TC92 643 aaKnown RBP16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 SEMA4DQ92854 862 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 ELMO3Q96BJ8 720 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 FUBP3Q96I24 572 aaKnown RBP eCLIP16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 PKMYT1Q99640 499 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 SEPT5Q99719 369 aaPredicted RBP16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 BCO2Q9BYV7 579 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 APOBEC3GQ9HC16 384 aaKnown RBP16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 ABCB6Q9NP58 842 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 NR2E1Q9Y466 385 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 C2orf16Q68DN1 1984 aa16.06■□□□□ 0.16
IGHV3-53-201ENST00000390627 EPHB3P54753 998 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 CDH8P55286 799 aa16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 PSMC1P62191 440 aaKnown RBP16.05■□□□□ 0.16
IGHV3-53-201ENST00000390627 IQCEQ6IPM2 695 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms