RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 LEO1Q8WVC0 666 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-204ENST00000376643 FAM213AQ9BRX8 229 aa15.9■□□□□ 0.14
HDAC6-204ENST00000376643 CRISPLD1Q9H336 500 aa15.9■□□□□ 0.14
HDAC6-204ENST00000376643 ABCB6Q9NP58 842 aa15.9■□□□□ 0.14
HDAC6-204ENST00000376643 RBAKQ9NYW8 714 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-204ENST00000376643 CLIC4Q9Y696 253 aa15.9■□□□□ 0.14
HDAC6-204ENST00000376643 F5P12259 2224 aa15.9■□□□□ 0.14
HDAC6-204ENST00000376643 VPS13AQ96RL7 3174 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 FOXD2O60548 495 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-204ENST00000376643 PAPSS2O95340 614 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-204ENST00000376643 CSH1P0DML2 217 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 CSH2P0DML3 217 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 HAPLN1P10915 354 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-204ENST00000376643 SYT1P21579 422 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 AVPR1AP37288 418 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 RPL10AP62906 217 aaKnown RBP15.89■□□□□ 0.13
HDAC6-204ENST00000376643 TFAMQ00059 246 aaKnown RBP15.89■□□□□ 0.13
HDAC6-204ENST00000376643 AMPD3Q01432 767 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 RESTQ13127 1097 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 FZD5Q13467 585 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 GAREM2Q75VX8 874 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 ZNF687Q8N1G0 1237 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 ACBD6Q9BR61 282 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 STRA6Q9BX79 667 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 CUEDC2Q9H467 287 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 ABI2Q9NYB9 513 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-204ENST00000376643 SPTBN4Q9H254 2564 aa15.89■□□□□ 0.13
HDAC6-204ENST00000376643 OTOGLQ3ZCN5 2332 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 MYBPHLA2RUH7 354 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 MYMKA6NI61 221 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 SPECC1L-ADORA2AF8WAN1 911 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 EXTL3O43909 919 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 TMEM191BP0C7N4 346 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 CHRNB1P11230 501 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 PCSK1P29120 753 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 ADSSP30520 456 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 CTHP32929 405 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 RBP5P82980 135 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 BFSP1Q12934 665 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 MYO1EQ12965 1108 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 SLC39A14Q15043 492 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 WSCD1Q658N2 575 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 CRELD2Q6UXH1 353 aaPredicted RBP15.88■□□□□ 0.13
HDAC6-204ENST00000376643 EFCAB13Q8IY85 973 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 MRPS31Q92665 395 aaKnown RBP15.88■□□□□ 0.13
HDAC6-204ENST00000376643 DNAJC19Q96DA6 116 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 ANKRD36BP1Q96IX9 119 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 TMEM209Q96SK2 561 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 KIAA1586Q9HCI6 787 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 PANK4Q9NVE7 773 aa15.88■□□□□ 0.13
HDAC6-204ENST00000376643 FRMD3A2A2Y4 597 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 SHISA7A6NL88 538 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 SLC38A8A6NNN8 435 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 LRP3O75074 770 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 ITGB3P05106 788 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 ATF6P18850 670 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 POLR2BP30876 1174 aaKnown RBP15.87■□□□□ 0.13
HDAC6-204ENST00000376643 LHX1P48742 406 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 ITPRIPL2Q3MIP1 535 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 LAIR1Q6GTX8 287 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 CC2D1AQ6P1N0 951 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-204ENST00000376643 TOP6BLQ8N6T0 577 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 RMDN1Q96DB5 314 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 FUBP3Q96I24 572 aaKnown RBP eCLIP15.87■□□□□ 0.13
HDAC6-204ENST00000376643 CEP295NLQ96MC4 621 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 LPIN3Q9BQK8 851 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 TNMDQ9H2S6 317 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 EHD2Q9NZN4 543 aa15.87■□□□□ 0.13
HDAC6-204ENST00000376643 TISP43B9A030 160 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 TULP1O00294 542 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-204ENST00000376643 ATG13O75143 517 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 PRPF40AO75400 957 aaKnown RBP15.86■□□□□ 0.13
HDAC6-204ENST00000376643 SOAT2O75908 522 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 TNNC2P02585 160 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 PDE6CP51160 858 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 CEBPZQ03701 1054 aaKnown RBP15.86■□□□□ 0.13
HDAC6-204ENST00000376643 STK38Q15208 465 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 MAPRE1Q15691 268 aaKnown RBP15.86■□□□□ 0.13
HDAC6-204ENST00000376643 STXBP5Q5T5C0 1151 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 TSSK4Q6SA08 328 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 USP49Q70CQ1 688 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 DPH6Q7L8W6 267 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 CMTM8Q8IZV2 173 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 GPD1LQ8N335 351 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 CSGALNACT2Q8N6G5 542 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 TTC9BQ8N6N2 239 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 FSIP1Q8NA03 581 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 ZNF396Q96N95 335 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-204ENST00000376643 CLIC6Q96NY7 704 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 MKNK1Q9BUB5 465 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 GDAP2Q9NXN4 497 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 DDX43Q9NXZ2 648 aaKnown RBP15.86■□□□□ 0.13
HDAC6-204ENST00000376643 DLL3Q9NYJ7 618 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 TBC1D7Q9P0N9 293 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 AGAP1Q9UPQ3 857 aa15.86■□□□□ 0.13
HDAC6-204ENST00000376643 TSC2P49815 1807 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 ZNF233A6NK53 670 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 NRG2O14511 850 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-204ENST00000376643 KRT19P08727 400 aa15.85■□□□□ 0.13
HDAC6-204ENST00000376643 TDGF1P13385 188 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms