RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 CCDC142Q17RM4 750 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 CTU1Q7Z7A3 348 aaKnown RBP12.29□□□□□ -0.44
DDR1-227ENST00000376570 ANKRD13AQ8IZ07 590 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 DNAAF3Q8N9W5 541 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 ATL2Q8NHH9 583 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 LRRC8CQ8TDW0 803 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 SLC40A1Q9NP59 571 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 IL1RAPL1Q9NZN1 696 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
DDR1-227ENST00000376570 DDX60Q8IY21 1712 aaKnown RBP12.28□□□□□ -0.44
DDR1-227ENST00000376570 CHUKO15111 745 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 OGTO15294 1046 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 SRGAP2BP0DMP2 458 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 EPHX2P34913 555 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 MSH2P43246 934 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 GAD2Q05329 585 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 BMPR2Q13873 1038 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 TMEM132DQ14C87 1099 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 ARMCX2Q7L311 632 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 DNAJB3Q8WWF6 145 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 TFAP2BQ92481 460 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 P3H4Q92791 437 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 HES6Q96HZ4 224 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 SEC16BQ96JE7 1060 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 CFAP57Q96MR6 1250 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 PITPNM3Q9BZ71 974 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 LTBP4Q8N2S1 1624 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 H3BRB1 525 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 TGFB2P61812 414 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 ABHD15Q6UXT9 468 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 SCN4BQ8IWT1 228 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 SCFD2Q8WU76 684 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 SPOCK2Q92563 424 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 KLHL29Q96CT2 875 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 XPO6Q96QU8 1125 aaKnown RBP12.28□□□□□ -0.44
DDR1-227ENST00000376570 PABPC3Q9H361 631 aaKnown RBP12.28□□□□□ -0.44
DDR1-227ENST00000376570 TUT1Q9H6E5 874 aaKnown RBP12.28□□□□□ -0.44
DDR1-227ENST00000376570 KIAA0391O15091 583 aaKnown RBP12.28□□□□□ -0.44
DDR1-227ENST00000376570 ADCY3O60266 1144 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 P4HA1P13674 534 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 MAGEA4P43358 317 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 AP1B1Q10567 949 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 SETDB1Q15047 1291 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 BMT2Q1RMZ1 405 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 GOLGA7BQ2TAP0 167 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 ABRAQ8N0Z2 381 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 FAM136AQ96C01 138 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 CHMP6Q96FZ7 201 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 LRRC4Q9HBW1 653 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 KLHL14Q9P2G3 628 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 UVRAGQ9P2Y5 699 aa12.28□□□□□ -0.44
DDR1-227ENST00000376570 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.27□□□□□ -0.44
DDR1-227ENST00000376570 USP12O75317 370 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 CYP2C9P11712 490 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 NDST1P52848 882 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 ATXN1P54253 815 aaKnown RBP12.27□□□□□ -0.44
DDR1-227ENST00000376570 CCNA1P78396 465 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 SLMAPQ14BN4 828 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 EFTUD2Q15029 972 aaKnown RBP eCLIP12.27□□□□□ -0.444e-6■■■■□ 22.5
DDR1-227ENST00000376570 RAB6CQ53S08 254 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 C1orf220Q5T0J3 134 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 C3orf62Q6ZUJ4 267 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 APBB1IPQ7Z5R6 666 aaPredicted RBP12.27□□□□□ -0.44
DDR1-227ENST00000376570 C18orf25Q96B23 403 aaPredicted RBP12.27□□□□□ -0.44
DDR1-227ENST00000376570 HERPUD2Q9BSE4 406 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 RAB6CQ9H0N0 254 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 SCINQ9Y6U3 715 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 SLX4Q8IY92 1834 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 CCDC88AQ3V6T2 1871 aa12.27□□□□□ -0.44
DDR1-227ENST00000376570 MYH7BA7E2Y1 1941 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.27□□□□□ -0.45
DDR1-227ENST00000376570 GTPBP10A4D1E9 387 aaKnown RBP12.27□□□□□ -0.45
DDR1-227ENST00000376570 GOLGA8TH3BQL2 631 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 PDHXO00330 501 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 ATP4AP20648 1035 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 PCK1P35558 622 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 NAMPTP43490 491 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 AARSP49588 968 aaKnown RBP eCLIP12.27□□□□□ -0.45
DDR1-227ENST00000376570 HUNKP57058 714 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 SLC20A2Q08357 652 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 C6orf118Q5T5N4 469 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 DEPDC1BQ8WUY9 529 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 BHMTQ93088 406 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 L3MBTL3Q96JM7 780 aaPredicted RBP12.27□□□□□ -0.45
DDR1-227ENST00000376570 RPS6KC1Q96S38 1066 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 DMAC2Q9NW81 257 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 IP6K2Q9UHH9 426 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 SUFUQ9UMX1 484 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 ATP9BO43861 1147 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 FARP2O94887 1054 aaPredicted RBP12.27□□□□□ -0.45
DDR1-227ENST00000376570 CCDC130P13994 396 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 PECAM1P16284 738 aaPredicted RBP12.27□□□□□ -0.45
DDR1-227ENST00000376570 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
DDR1-227ENST00000376570 ATXN3P54252 364 aaPredicted RBP12.27□□□□□ -0.45
DDR1-227ENST00000376570 ITIH3Q06033 890 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 SPARCL1Q14515 664 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 SGSM1Q2NKQ1 1148 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 DCAF6Q58WW2 860 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 METTL7BQ6UX53 244 aa12.27□□□□□ -0.45
DDR1-227ENST00000376570 IQCKQ8N0W5 287 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms