RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 ELMO3Q96BJ8 720 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 MS4A4AQ96JQ5 239 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 TTC25Q96NG3 672 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 PRMT1Q99873 361 aaKnown RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 JPH2Q9BR39 696 aaPredicted RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 PLCD4Q9BRC7 762 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 HERPUD2Q9BSE4 406 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 FRMD8P1Q9BZ68 369 aaPredicted RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 OSBPL7Q9BZF2 842 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 PPCSQ9HAB8 311 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 ZFYVE28Q9HCC9 887 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 R3HDM2Q9Y2K5 976 aaKnown RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 CDH16O75309 829 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 KRT1P04264 644 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 VIMP08670 466 aaKnown RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 KLRC2P26717 231 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 CDH5P33151 784 aaPredicted RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 PIGHQ14442 188 aaPredicted RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 MXD4Q14582 209 aaPredicted RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 TAF1CQ15572 869 aaPredicted RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 LONRF1Q17RB8 773 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 FBXW10Q5XX13 1052 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 CDCA2Q69YH5 1023 aaPredicted RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 HIBCHQ6NVY1 386 aaPredicted RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 DNAJC24Q6P3W2 148 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 SEPT14Q6ZU15 432 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 OR5B17Q8NGF7 314 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 DYDC1Q8WWB3 177 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 BRI3BPQ8WY22 251 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 SEPT1Q8WYJ6 367 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 ARMC5Q96C12 935 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 FAXDC2Q96IV6 333 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 STRIP2Q9ULQ0 834 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 PCDHGC3Q9UN70 934 aa14.74□□□□□ -0.05
HMGCL-203ENST00000374490 DRG1Q9Y295 367 aaKnown RBP14.74□□□□□ -0.05
HMGCL-203ENST00000374490 OGTO15294 1046 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 LIASO43766 372 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 EIF4BP23588 611 aaKnown RBP14.73□□□□□ -0.05
HMGCL-203ENST00000374490 RDXP35241 583 aaKnown RBP14.73□□□□□ -0.05
HMGCL-203ENST00000374490 CNTN2Q02246 1040 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 DUOXA2Q1HG44 320 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 ZBTB41Q5SVQ8 909 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 WDR78Q5VTH9 848 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 KCNV1Q6PIU1 500 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 GSTA5Q7RTV2 222 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 PHLDB2Q86SQ0 1253 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 NIPA2Q8N8Q9 360 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 CFAP57Q96MR6 1250 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 SLITRK1Q96PX8 696 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 PCYT2Q99447 389 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 HEMGNQ9BXL5 484 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 USTQ9Y2C2 406 aa14.73□□□□□ -0.05
HMGCL-203ENST00000374490 TCRBV5S1A1TA0A578 114 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 TMEM120BA0PK00 339 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 DNALI1O14645 258 aaPredicted RBP14.72□□□□□ -0.05
HMGCL-203ENST00000374490 RASSF9O75901 435 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 CD58P19256 250 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 POLR2BP30876 1174 aaKnown RBP14.72□□□□□ -0.05
HMGCL-203ENST00000374490 SCTRP47872 440 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 TRPC3Q13507 836 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 KCTD2Q14681 263 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 TRIP13Q15645 432 aaPredicted RBP14.72□□□□□ -0.05
HMGCL-203ENST00000374490 UBAP2Q5T6F2 1119 aaKnown RBP14.72□□□□□ -0.05
HMGCL-203ENST00000374490 METTL7BQ6UX53 244 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 PPP1R21Q6ZMI0 780 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 ARHGEF18Q6ZSZ5 1173 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 FAM212AQ96EL1 285 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 FAM84AQ96KN4 292 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 MMP19Q99542 508 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 TMEM106CQ9BVX2 250 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 MROH8Q9H579 483 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 TXNRD2Q9NNW7 524 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 SLC40A1Q9NP59 571 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 UBN1Q9NPG3 1134 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 NKIRAS1Q9NYS0 192 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 RBPJLQ9UBG7 517 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 SLC45A1Q9Y2W3 748 aa14.72□□□□□ -0.05
HMGCL-203ENST00000374490 TNRC18O15417 2968 aaPredicted RBP14.71□□□□□ -0.05
HMGCL-203ENST00000374490 MED7O43513 233 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 MSCO60682 206 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 PRKCBP05771 671 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 CFHP08603 1231 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 CCNA1P78396 465 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 XRCC4Q13426 336 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 TFDP1Q14186 410 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 LLGL1Q15334 1064 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 MAPK6Q16659 721 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 KYNUQ16719 465 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 SWT1Q5T5J6 900 aaKnown RBP14.71□□□□□ -0.05
HMGCL-203ENST00000374490 LLGL2Q6P1M3 1020 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 DCUN1D2Q6PH85 259 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 VSTM1Q6UX27 236 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 SPOCD1Q6ZMY3 1216 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 POLNQ7Z5Q5 900 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 SHCBP1Q8NEM2 672 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 CKAP2Q8WWK9 683 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 ACO2Q99798 780 aaKnown RBP14.71□□□□□ -0.05
HMGCL-203ENST00000374490 PHACTR1Q9C0D0 580 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 KLC4Q9NSK0 619 aa14.71□□□□□ -0.05
HMGCL-203ENST00000374490 CPSF3Q9UKF6 684 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms