RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 GEMIN4P57678 1058 aaKnown RBP14.41□□□□□ -0.1
USP49-201ENST00000373006 DYNLT1P63172 113 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 SGSM1Q2NKQ1 1148 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 MSS51Q4VC12 460 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 LRRC74BQ6ZQY2 392 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 C3orf62Q6ZUJ4 267 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 CCNJLQ8IV13 435 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 RIT2Q99578 217 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 TAS2R1Q9NYW7 299 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 SCOCQ9UIL1 159 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 WASF2Q9Y6W5 498 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 IVNS1ABPQ9Y6Y0 642 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 ZNFX1Q9P2E3 1918 aaKnown RBP14.41□□□□□ -0.1
USP49-201ENST00000373006 KRT1P04264 644 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 MAPTP10636 758 aaKnown RBP14.41□□□□□ -0.1
USP49-201ENST00000373006 SKIP12755 728 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 NPTX2P47972 431 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 SLC18A1P54219 525 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 THOC5Q13769 683 aaKnown RBP14.41□□□□□ -0.1
USP49-201ENST00000373006 LIN9Q5TKA1 542 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 FOXB2Q5VYV0 432 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 SLC39A4Q6P5W5 647 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 ZNF276Q8N554 614 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 TMEM161BQ8NDZ6 487 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 ZNF516Q92618 1163 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 NSL1Q96IY1 281 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 TRIM55Q9BYV6 548 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 RABGEF1Q9UJ41 708 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 LRCH1Q9Y2L9 728 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 DHX15O43143 795 aaKnown RBP14.4□□□□□ -0.1
USP49-201ENST00000373006 PSMG1O95456 288 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 UBTFL6P0CB48 400 aaPredicted RBP14.4□□□□□ -0.1
USP49-201ENST00000373006 KCNA3P22001 575 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 LMNB2Q03252 620 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 SLC34A1Q06495 639 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 CYP24A1Q07973 514 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 SYCP2LQ5T4T6 812 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 RNASEH2BQ5TBB1 312 aaKnown RBP14.4□□□□□ -0.1
USP49-201ENST00000373006 IRGCQ6NXR0 463 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 TMEM270Q6UE05 265 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 ALLCQ8N6M5 410 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 PYROXD1Q8WU10 500 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 STMN2Q93045 179 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 PTCD3Q96EY7 689 aaKnown RBP14.4□□□□□ -0.1
USP49-201ENST00000373006 CSRNP1Q96S65 589 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 PAFAH2Q99487 392 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 COL20A1Q9P218 1284 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.4□□□□□ -0.1
USP49-201ENST00000373006 CLUHO75153 1309 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 F8VP50 259 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 ATP2A1O14983 1001 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 ECE2O60344 883 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 ZWINTO95229 277 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 ESRRAP11474 423 aaPredicted RBP14.4□□□□□ -0.1
USP49-201ENST00000373006 CACNA2D1P54289 1103 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 PTP4A2Q12974 167 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 FNBP1LQ5T0N5 605 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 ANKRD22Q5VYY1 191 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 PDCD7Q8N8D1 485 aaKnown RBP14.4□□□□□ -0.1
USP49-201ENST00000373006 TTC17Q96AE7 1141 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 AGBL1Q96MI9 1066 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 TSSK1BQ9BXA7 367 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 TMEM120AQ9BXJ8 343 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 FOXP3Q9BZS1 431 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 EHMT1Q9H9B1 1298 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 SCAF8Q9UPN6 1271 aaKnown RBP14.4□□□□□ -0.1
USP49-201ENST00000373006 CLRN2A0PK11 232 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 TCP10L2B9ZVM9 353 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 POLRMTO00411 1230 aaKnown RBP14.4□□□□□ -0.1
USP49-201ENST00000373006 CYP1A1P04798 512 aaPredicted RBP14.4□□□□□ -0.1
USP49-201ENST00000373006 ZCCHC18P0CG32 403 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 GLRA2P23416 452 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 ROR2Q01974 943 aaKnown RBP14.4□□□□□ -0.1
USP49-201ENST00000373006 GCNT1Q02742 428 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 HIF1AQ16665 826 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 CMPK2Q5EBM0 449 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 MDH1BQ5I0G3 518 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 ISLR2Q6UXK2 745 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 LDHDQ86WU2 507 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 RHPN2Q8IUC4 686 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 GALNT15Q8N3T1 639 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 SLITRK1Q96PX8 696 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 WDR35Q9P2L0 1181 aa14.4□□□□□ -0.1
USP49-201ENST00000373006 MRPL11Q9Y3B7 192 aaKnown RBP14.4□□□□□ -0.1
USP49-201ENST00000373006 SMAPO00193 183 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 ABLIM1O14639 778 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 HNRNPDLO14979 420 aaKnown RBP14.39□□□□□ -0.11
USP49-201ENST00000373006 TJP3O95049 919 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 TNNI1P19237 187 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 AMPD1P23109 780 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 NCKAP1LP55160 1127 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 MORF4L2Q15014 288 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 RASIP1Q5U651 963 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 CEP128Q6ZU80 1094 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 KBTBD2Q8IY47 623 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 BSNDQ8WZ55 320 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 TRIM11Q96F44 468 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 KCNK13Q9HB14 408 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 KMT5AQ9NQR1 393 aa14.39□□□□□ -0.11
USP49-201ENST00000373006 SLC24A2Q9UI40 661 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms