RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 BICDL2A1A5D9 508 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 CAPN8A6NHC0 703 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 ZBED4O75132 1171 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 MYO1DO94832 1006 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 DEXIO95424 95 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 CCDC130P13994 396 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 PON1P27169 355 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 KRT2P35908 639 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 RPS3AP61247 264 aaKnown RBP11.17□□□□□ -0.62
TRERF1-203ENST00000372917 EFTUD2Q15029 972 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRERF1-203ENST00000372917 GRIK5Q16478 980 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 IFIT1BQ5T764 474 aaKnown RBP11.17□□□□□ -0.62
TRERF1-203ENST00000372917 ZNF746Q6NUN9 644 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-203ENST00000372917 DNAAF5Q86Y56 855 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 CLIP4Q8N3C7 705 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 C10orf82Q8WW14 230 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 OMA1Q96E52 524 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 TUBB6Q9BUF5 446 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 RSPH9Q9H1X1 276 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-203ENST00000372917 CNNM2Q9H8M5 875 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRERF1-203ENST00000372917 NCKIPSDQ9NZQ3 722 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 GMIPQ9P107 970 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 TXNDC16Q9P2K2 825 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 ATMINO43313 823 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-203ENST00000372917 UGT1A9O60656 530 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 ZC3H11AO75152 810 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRERF1-203ENST00000372917 MMP1P03956 469 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 SRGAP2CP0DJJ0 459 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 SRGAP2BP0DMP2 458 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 THRAP10827 490 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 UGT1A6P19224 532 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 UGT1A1P22309 533 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 UGT1A4P22310 534 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 UGT1A3P35503 534 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 UGT1A5P35504 534 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 PPP2R2BQ00005 443 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 ZNF829Q3KNS6 432 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-203ENST00000372917 RABGAP1LQ5R372 815 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 HEATR4Q86WZ0 1026 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 HCAR2Q8TDS4 363 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 PANX3Q96QZ0 392 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 UGT1A7Q9HAW7 530 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 UGT1A10Q9HAW8 530 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 UGT1A8Q9HAW9 530 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 TACC3Q9Y6A5 838 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 PFASO15067 1338 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 STK36Q9NRP7 1315 aa11.17□□□□□ -0.62
TRERF1-203ENST00000372917 CIAO1O76071 339 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 PTGS2P35354 604 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 KLRC3Q07444 240 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 MOGSQ13724 837 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 ZYXQ15942 572 aaKnown RBP11.16□□□□□ -0.62
TRERF1-203ENST00000372917 TRMT5Q32P41 509 aaKnown RBP11.16□□□□□ -0.62
TRERF1-203ENST00000372917 KIAA1755Q5JYT7 1200 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 TMCO4Q5TGY1 634 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 ATG9AQ7Z3C6 839 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 HDAC2Q92769 488 aaKnown RBP11.16□□□□□ -0.62
TRERF1-203ENST00000372917 PHF20Q9BVI0 1012 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 TRIM55Q9BYV6 548 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 SMYD3Q9H7B4 428 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 NEK6Q9HC98 313 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 ADAMTS1Q9UHI8 967 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 MRC1P22897 1456 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 NWD1Q149M9 1564 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 BUD23O43709 281 aaKnown RBP11.16□□□□□ -0.62
TRERF1-203ENST00000372917 PHF2O75151 1096 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 TGFB3P10600 412 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 TLR1Q15399 786 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 CARTPTQ16568 116 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 NLRX1Q86UT6 975 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 APPL2Q8NEU8 664 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 SH3RF3Q8TEJ3 882 aaPredicted RBP11.16□□□□□ -0.62
TRERF1-203ENST00000372917 FBXO6Q9NRD1 293 aaPredicted RBP11.16□□□□□ -0.62
TRERF1-203ENST00000372917 PCDHGB4Q9UN71 923 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 JAG2Q9Y219 1238 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 ANGPTL3Q9Y5C1 460 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 PCDHGB5Q9Y5G0 923 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 SLC30A1Q9Y6M5 507 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 XDHP47989 1333 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 SNPHO15079 494 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 CYP26A1O43174 497 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 TFAP4Q01664 338 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 SH3RF1Q7Z6J0 888 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 PEX13Q92968 403 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 PGBD4Q96DM1 585 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 C17orf80Q9BSJ5 609 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 TP63Q9H3D4 680 aaPredicted RBP11.16□□□□□ -0.62
TRERF1-203ENST00000372917 C8orf4Q9NR00 106 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 ZDHHC18Q9NUE0 388 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 ARMCX1Q9P291 453 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 NR2E1Q9Y466 385 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 CFAP99D6REC4 459 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 IRS4O14654 1257 aaPredicted RBP11.16□□□□□ -0.62
TRERF1-203ENST00000372917 SGTAO43765 313 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 ENO1P06733 434 aaKnown RBP11.16□□□□□ -0.62
TRERF1-203ENST00000372917 COL6A1P12109 1028 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 KRT6CP48668 564 aa11.16□□□□□ -0.62
TRERF1-203ENST00000372917 NIPAL4Q0D2K0 466 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms