RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 TBC1D10AQ9BXI6 508 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 SLC7A5P2Q9GIP4 190 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 NEUROG2Q9H2A3 272 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 LRRC4CQ9HCJ2 640 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 FGFR1OP2Q9NVK5 253 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 TTC7AQ9ULT0 858 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-203ENST00000372232 HBS1LQ9Y450 684 aaKnown RBP9.33□□□□□ -0.92
ATG4A-203ENST00000372232 PRKAB1Q9Y478 270 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 GPC6Q9Y625 555 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-203ENST00000372232 A6NJY4 79 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 SPECC1L-ADORA2AF8WAN1 911 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 CYP2C9P11712 490 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 SLC16A2P36021 539 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 CACNB3P54284 484 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 CSE1LP55060 971 aaKnown RBP9.33□□□□□ -0.92
ATG4A-203ENST00000372232 FKBP1AP62942 108 aaKnown RBP9.33□□□□□ -0.92
ATG4A-203ENST00000372232 ASIC1P78348 528 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 PFKPQ01813 784 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 CYP27A1Q02318 531 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 MAP3K10Q02779 954 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 UBXN1Q04323 297 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 MGAT5Q09328 741 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 STK4Q13043 487 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 SPA17Q15506 151 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 KHDC1Q4VXA5 237 aaKnown RBP9.33□□□□□ -0.92
ATG4A-203ENST00000372232 FAM209AQ5JX71 171 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 DACT2Q5SW24 774 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 KLHDC7AQ5VTJ3 777 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 ARHGAP27Q6ZUM4 889 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 KCTD1Q719H9 257 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 KBTBD2Q8IY47 623 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 MB21D1Q8N884 522 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 CCDC74AQ96AQ1 378 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 HSPBAP1Q96EW2 488 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 IDI2Q9BXS1 227 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 AIPL1Q9NZN9 384 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 ZNF212Q9UDV6 495 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 SSX2IPQ9Y2D8 614 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 PCDHAC2Q9Y5I4 1007 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 DDTLA6NHG4 134 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-203ENST00000372232 GOLGA8TH3BQL2 631 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 ADAM23O75077 832 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 NUDT17P0C025 328 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 TMED10P49755 219 aaKnown RBP9.32□□□□□ -0.92
ATG4A-203ENST00000372232 TCP10Q12799 353 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 GRB10Q13322 594 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 UBE2SQ16763 222 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 TMEM266Q2M3C6 531 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 CERKLQ49MI3 558 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-203ENST00000372232 STYK1Q6J9G0 422 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 PLEKHO2Q8TD55 490 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 STARD8Q92502 1023 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 EMID1Q96A84 441 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-203ENST00000372232 SLC7A6OSQ96CW6 309 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-203ENST00000372232 DYDC2Q96IM9 177 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 TRIM47Q96LD4 638 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 INPP4AQ96PE3 977 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-203ENST00000372232 PPP1R10Q96QC0 940 aaKnown RBP9.32□□□□□ -0.92
ATG4A-203ENST00000372232 TXLNGYQ9BZA5 131 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 KRT82Q9NSB4 513 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 STX18Q9P2W9 335 aaKnown RBP9.32□□□□□ -0.92
ATG4A-203ENST00000372232 PI4KBQ9UBF8 816 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 ZNHIT2Q9UHR6 403 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 HCN4Q9Y3Q4 1203 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 PCDHB2Q9Y5E7 798 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 NOX1Q9Y5S8 564 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 COL11A2P13942 1736 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-203ENST00000372232 SH3PXD2BA1X283 911 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 LGALS16A8MUM7 142 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 H0YIN7 160 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 VILLO15195 856 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 DGKIO75912 1065 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 ZBED1O96006 694 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 AGTP01019 485 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 EEF2P13639 858 aaKnown RBP9.32□□□□□ -0.92
ATG4A-203ENST00000372232 GRIA2P42262 883 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 GRM2Q14416 872 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 C4orf50Q6ZRC1 276 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 SV2BQ7L1I2 683 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 ECHDC2Q86YB7 292 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 CSGALNACT2Q8N6G5 542 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 ZNF507Q8TCN5 953 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 P2RX5Q93086 422 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 EAF1Q96JC9 268 aaPredicted RBP9.32□□□□□ -0.92
ATG4A-203ENST00000372232 PNMA5Q96PV4 448 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 STK33Q9BYT3 514 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 RAB34Q9BZG1 259 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 TTYH3Q9C0H2 523 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 PSTPIP2Q9H939 334 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 PARVBQ9HBI1 364 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 USP29Q9HBJ7 922 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 BLOC1S4Q9NUP1 217 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 MKS1Q9NXB0 559 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 CLIC5Q9NZA1 410 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 KLHL14Q9P2G3 628 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 STK17AQ9UEE5 414 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 PCDHA13Q9Y5I0 950 aa9.32□□□□□ -0.92
ATG4A-203ENST00000372232 BICDL2A1A5D9 508 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 TTC34A8MYJ7 566 aa9.31□□□□□ -0.92
ATG4A-203ENST00000372232 TCP11X1B4DZS4 312 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms