RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 KRT4P19013 534 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 RGS2P41220 211 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 CASP4P49662 377 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 FAM117BQ6P1L5 589 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 NOA1Q8NC60 698 aaKnown RBP20.54■□□□□ 0.88
LMO4-202ENST00000370544 ACSF2Q96CM8 615 aaPredicted RBP20.54■□□□□ 0.88
LMO4-202ENST00000370544 RANBP17Q9H2T7 1088 aaKnown RBP20.54■□□□□ 0.88
LMO4-202ENST00000370544 KDSRQ06136 332 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 GLRA4Q5JXX5 417 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 RFX8Q6ZV50 586 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 ERO1BQ86YB8 467 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 TEX12Q9BXU0 123 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 PGK2P07205 417 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 PGM1P36871 562 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 GTF2H3Q13889 308 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 TTC39BQ5VTQ0 682 aaPredicted RBP20.54■□□□□ 0.88
LMO4-202ENST00000370544 AP1ARQ63HQ0 302 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 ANO5Q75V66 913 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 SLC13A5Q86YT5 568 aaPredicted RBP20.54■□□□□ 0.88
LMO4-202ENST00000370544 CBWD1Q9BRT8 395 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 CARD9Q9H257 536 aa20.54■□□□□ 0.88
LMO4-202ENST00000370544 GPBP1L1Q9HC44 474 aaPredicted RBP20.54■□□□□ 0.88
LMO4-202ENST00000370544 ANGPT2O15123 496 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 MAP4P27816 1152 aaKnown RBP20.53■□□□□ 0.88
LMO4-202ENST00000370544 CLCN3P51790 818 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 MDH1BQ5I0G3 518 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 TTI2Q6NXR4 508 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 CALML6Q8TD86 181 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 XPO6Q96QU8 1125 aaKnown RBP20.53■□□□□ 0.88
LMO4-202ENST00000370544 KDM4CQ9H3R0 1056 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 ADARB2Q9NS39 739 aaKnown RBP20.53■□□□□ 0.88
LMO4-202ENST00000370544 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.53■□□□□ 0.88
LMO4-202ENST00000370544 PCDHGB4Q9UN71 923 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 KIF20BQ96Q89 1820 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 ASMTLO95671 621 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 AMHR2Q16671 573 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 RNF180Q86T96 592 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 MROH8Q9H579 483 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 SH3BP1Q9Y3L3 701 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 EIF3HO15372 352 aaKnown RBP eCLIP20.53■□□□□ 0.88
LMO4-202ENST00000370544 MYL2P10916 166 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 GARTP22102 1010 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 MMP14P50281 582 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 PKN1Q16512 942 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 BOLA3Q53S33 107 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 CD302Q8IX05 232 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 FBXO16Q8IX29 292 aaPredicted RBP20.53■□□□□ 0.88
LMO4-202ENST00000370544 LZICQ8WZA0 190 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 ZIM3Q96PE6 472 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 AGO4Q9HCK5 861 aaKnown RBP20.53■□□□□ 0.88
LMO4-202ENST00000370544 SNX5Q9Y5X3 404 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 A0A087X0T9 212 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 MTSS1O43312 755 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 HNRNPCL1O60812 293 aaKnown RBP20.53■□□□□ 0.88
LMO4-202ENST00000370544 SNRPAP09012 282 aaKnown RBP20.53■□□□□ 0.88
LMO4-202ENST00000370544 FAM228BP0C875 321 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 AKT1P31749 480 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 NTRK3Q16288 839 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 PLEKHH3Q7Z736 793 aa20.53■□□□□ 0.88
LMO4-202ENST00000370544 RNF168Q8IYW5 571 aaPredicted RBP20.53■□□□□ 0.88
LMO4-202ENST00000370544 C10orf120Q5SQS8 335 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 CHSY1Q86X52 802 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 ICA1LQ8NDH6 482 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 CCT8L2Q96SF2 557 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 WARS2Q9UGM6 360 aaKnown RBP20.52■□□□□ 0.88
LMO4-202ENST00000370544 ZNF263O14978 683 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 HARS2P49590 506 aaKnown RBP20.52■□□□□ 0.88
LMO4-202ENST00000370544 RAD23BP54727 409 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 NYAP1Q6ZVC0 841 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 REXO1L1PQ8IX06 675 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 ARHGAP18Q8N392 663 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 CGRRF1Q99675 332 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 PHF20L1A8MW92 1017 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 THPOP40225 353 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 SERPINB4P48594 390 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 FNTAP49354 379 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 MAPRE1Q15691 268 aaKnown RBP20.52■□□□□ 0.88
LMO4-202ENST00000370544 RIN2Q8WYP3 895 aaPredicted RBP20.52■□□□□ 0.88
LMO4-202ENST00000370544 USP15Q9Y4E8 981 aaPredicted RBP20.52■□□□□ 0.88
LMO4-202ENST00000370544 SALL3Q9BXA9 1300 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 NFIBO00712 420 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 PDHA1P08559 390 aa20.52■□□□□ 0.88
LMO4-202ENST00000370544 RIBC1Q8N443 379 aaPredicted RBP20.52■□□□□ 0.88
LMO4-202ENST00000370544 TFB1MQ8WVM0 346 aaKnown RBP20.52■□□□□ 0.88
LMO4-202ENST00000370544 ZC3H11AO75152 810 aaKnown RBP eCLIP20.52■□□□□ 0.87
LMO4-202ENST00000370544 ORC1Q13415 861 aa20.52■□□□□ 0.87
LMO4-202ENST00000370544 MARCOQ9UEW3 520 aaPredicted RBP20.52■□□□□ 0.87
LMO4-202ENST00000370544 ACTN3Q08043 901 aaPredicted RBP20.51■□□□□ 0.87
LMO4-202ENST00000370544 KIRREL3Q8IZU9 778 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 PPP2R3CQ969Q6 453 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 SLITRK1Q96PX8 696 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.51■□□□□ 0.87
LMO4-202ENST00000370544 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.51■□□□□ 0.87
LMO4-202ENST00000370544 ETFBP38117 255 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 ABCE1P61221 599 aaKnown RBP20.51■□□□□ 0.87
LMO4-202ENST00000370544 TGFB2P61812 414 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 MTM1Q13496 603 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 ZNF507Q8TCN5 953 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 GLT1D1Q96MS3 346 aa20.51■□□□□ 0.87
LMO4-202ENST00000370544 PRG3Q9Y2Y8 225 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms