RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 HSP90AA4PQ58FG1 418 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 WDR44Q5JSH3 913 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 INTS6LQ5JSJ4 861 aaKnown RBP15.87■□□□□ 0.13
COL9A1-204ENST00000370496 RNF19BQ6ZMZ0 732 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 DCP1BQ8IZD4 617 aaKnown RBP15.87■□□□□ 0.13
COL9A1-204ENST00000370496 OR6B3Q8NGW1 331 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 RIPOR3Q96MK2 946 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 ASB2Q96Q27 587 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 MRPL45Q9BRJ2 306 aaKnown RBP15.87■□□□□ 0.13
COL9A1-204ENST00000370496 RAB20Q9NX57 234 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 NFE2L3Q9Y4A8 694 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 CCDC195A0A1B0GUA6 201 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 MTMR11A4FU01 709 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 GRXCR2A6NFK2 248 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 HCRTO43612 131 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 ZMYND10O75800 440 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 LRG1P02750 347 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 ASPAP45381 313 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 PSMC1P62191 440 aaKnown RBP15.87■□□□□ 0.13
COL9A1-204ENST00000370496 MYL5Q02045 173 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 KCNH2Q12809 1159 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 ANO6Q4KMQ2 910 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 LIMS2Q7Z4I7 341 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 CMASQ8NFW8 434 aaPredicted RBP15.87■□□□□ 0.13
COL9A1-204ENST00000370496 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.87■□□□□ 0.13
COL9A1-204ENST00000370496 ENOX1Q8TC92 643 aaKnown RBP15.87■□□□□ 0.13
COL9A1-204ENST00000370496 SEMA4DQ92854 862 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 SYT15Q9BQS2 421 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 ACBD6Q9BR61 282 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 ADAM7Q9H2U9 754 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 PIDD1Q9HB75 910 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 INSL5Q9Y5Q6 135 aa15.87■□□□□ 0.13
COL9A1-204ENST00000370496 A8MXQ7 604 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 GABRDO14764 452 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 CCL16O15467 120 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 XYLBO75191 536 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 HNRNPA1P09651 372 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL9A1-204ENST00000370496 WEE2P0C1S8 567 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 PRKCSHP14314 528 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-204ENST00000370496 IL9P15248 144 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 HOXA9P31269 272 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 CBX2Q14781 532 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-204ENST00000370496 NFKBIBQ15653 356 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 NFE2Q16621 373 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-204ENST00000370496 TJAP1Q5JTD0 557 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 TCEAL8Q8IYN2 117 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 SMG7Q92540 1137 aaKnown RBP15.86■□□□□ 0.13
COL9A1-204ENST00000370496 SEPT5Q99719 369 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-204ENST00000370496 S1PR5Q9H228 398 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 APOBEC3GQ9HC16 384 aaKnown RBP15.86■□□□□ 0.13
COL9A1-204ENST00000370496 ABI2Q9NYB9 513 aaPredicted RBP15.86■□□□□ 0.13
COL9A1-204ENST00000370496 CDH22Q9UJ99 828 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 CDH9Q9ULB4 789 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 MAFFQ9ULX9 164 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 YIPF1Q9Y548 306 aa15.86■□□□□ 0.13
COL9A1-204ENST00000370496 KCNJ18B7U540 433 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 PES1O00541 588 aaKnown RBP15.85■□□□□ 0.13
COL9A1-204ENST00000370496 P4HA2O15460 535 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 SEC24AO95486 1093 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 PDGFRBP09619 1106 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 CD58P19256 250 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 TRIM21P19474 475 aaKnown RBP15.85■□□□□ 0.13
COL9A1-204ENST00000370496 GNL1P36915 607 aaPredicted RBP15.85■□□□□ 0.13
COL9A1-204ENST00000370496 MTHFRP42898 656 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 CDR1P51861 262 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 CDH8P55286 799 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 SMARCB1Q12824 385 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 PLD1Q13393 1074 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 KCNJ12Q14500 433 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 SMAD2Q15796 467 aaKnown RBP15.85■□□□□ 0.13
COL9A1-204ENST00000370496 MAN2A1Q16706 1144 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 UVSSAQ2YD98 709 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 GPR149Q86SP6 731 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 IRF2BP1Q8IU81 584 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 ELMOD1Q8N336 334 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 AOPEPQ8N6M6 819 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 SPPL2BQ8TCT7 592 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 C2orf15Q8WU43 125 aaKnown RBP15.85■□□□□ 0.13
COL9A1-204ENST00000370496 NECTIN4Q96NY8 510 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 BCO2Q9BYV7 579 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 SDCBP2Q9H190 292 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 SAMSN1Q9NSI8 373 aaKnown RBP15.85■□□□□ 0.13
COL9A1-204ENST00000370496 COQ4Q9Y3A0 265 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 PCDHB5Q9Y5E4 795 aa15.85■□□□□ 0.13
COL9A1-204ENST00000370496 TCF20Q9UGU0 1960 aaKnown RBP15.84■□□□□ 0.13
COL9A1-204ENST00000370496 LRRN2O75325 713 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 FAM163BP0C2L3 166 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 LMO2P25791 158 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 EEF1GP26641 437 aaKnown RBP15.84■□□□□ 0.13
COL9A1-204ENST00000370496 LRMPQ12912 555 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 DUSP4Q13115 394 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 MAPRE1Q15691 268 aaKnown RBP15.84■□□□□ 0.13
COL9A1-204ENST00000370496 CCDC142Q17RM4 750 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 ZSCAN23Q3MJ62 389 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 MGAT5BQ3V5L5 792 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 MDH1BQ5I0G3 518 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 ATAT1Q5SQI0 421 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 CYP26C1Q6V0L0 522 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 C4orf50Q6ZRC1 276 aa15.84■□□□□ 0.13
COL9A1-204ENST00000370496 RTL10Q7L3V2 364 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms