RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 CBWD3Q5JTY5 395 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 CBWD5Q5RIA9 395 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 RARS2Q5T160 578 aaKnown RBP10.58□□□□□ -0.72
NUP43-202ENST00000367402 LIN9Q5TKA1 542 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 SPOPLQ6IQ16 392 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 SYCE2Q6PIF2 218 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 C11orf57Q6ZUT1 292 aaPredicted RBP10.58□□□□□ -0.72
NUP43-202ENST00000367402 FAM114A1Q8IWE2 563 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.58□□□□□ -0.72
NUP43-202ENST00000367402 OR6B3Q8NGW1 331 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 OR10T2Q8NGX3 314 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 ENOX1Q8TC92 643 aaKnown RBP10.58□□□□□ -0.72
NUP43-202ENST00000367402 ATXN2LQ8WWM7 1075 aaKnown RBP10.58□□□□□ -0.72
NUP43-202ENST00000367402 ZDHHC16Q969W1 377 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 CNOT6LQ96LI5 555 aaKnown RBP10.58□□□□□ -0.72
NUP43-202ENST00000367402 PGLYRP2Q96PD5 576 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 TMEM209Q96SK2 561 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 DNAJC25Q9H1X3 360 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 SNX25Q9H3E2 840 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 THAP9Q9H5L6 903 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 VRTNQ9H8Y1 702 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 RAB20Q9NX57 234 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 POLIQ9UNA4 740 aa10.58□□□□□ -0.72
NUP43-202ENST00000367402 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.58□□□□□ -0.72
NUP43-202ENST00000367402 SYCE3A1L190 88 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 PRRG1O14668 218 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 N4BP1O75113 896 aaKnown RBP10.57□□□□□ -0.72
NUP43-202ENST00000367402 LRRN2O75325 713 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 ABLIM3O94929 683 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 ASS1P00966 412 aaKnown RBP10.57□□□□□ -0.72
NUP43-202ENST00000367402 C8AP07357 584 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 PDGFRBP09619 1106 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 ATF2P15336 505 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 WARSP23381 471 aaKnown RBP10.57□□□□□ -0.72
NUP43-202ENST00000367402 ACAT1P24752 427 aaKnown RBP10.57□□□□□ -0.72
NUP43-202ENST00000367402 MTIF2P46199 727 aaKnown RBP10.57□□□□□ -0.72
NUP43-202ENST00000367402 FMO5P49326 533 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 KCNQ1P51787 676 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 CDR1P51861 262 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 CDH8P55286 799 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 MARSP56192 900 aaKnown RBP10.57□□□□□ -0.72
NUP43-202ENST00000367402 TSPY1Q01534 308 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 ADCY1Q08828 1119 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 KCNH2Q12809 1159 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 GPR17Q13304 367 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 NFKBIBQ15653 356 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
NUP43-202ENST00000367402 SLC39A12Q504Y0 691 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 TPGS2Q68CL5 300 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 PTCRAQ6ISU1 281 aaPredicted RBP10.57□□□□□ -0.72
NUP43-202ENST00000367402 CES5AQ6NT32 575 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 TMC5Q6UXY8 1006 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 SCARA5Q6ZMJ2 495 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 RNF19BQ6ZMZ0 732 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 CCDC149Q6ZUS6 474 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 LIMS2Q7Z4I7 341 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 IRF2BP1Q8IU81 584 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 TRIM59Q8IWR1 403 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 DCP1BQ8IZD4 617 aaKnown RBP10.57□□□□□ -0.72
NUP43-202ENST00000367402 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.57□□□□□ -0.72
NUP43-202ENST00000367402 SLC7A14Q8TBB6 771 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 SPATA18Q8TC71 538 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 HDAC7Q8WUI4 952 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 SEMA4DQ92854 862 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 MSLNLQ96KJ4 702 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 ASB2Q96Q27 587 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 RTP3Q9BQQ7 232 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 ACBD6Q9BR61 282 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 MRPL45Q9BRJ2 306 aaKnown RBP10.57□□□□□ -0.72
NUP43-202ENST00000367402 NAT10Q9H0A0 1025 aaKnown RBP10.57□□□□□ -0.72
NUP43-202ENST00000367402 ZCWPW1Q9H0M4 648 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 S1PR5Q9H228 398 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 SFXN1Q9H9B4 322 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 CYP4F11Q9HBI6 524 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 FBXW11Q9UKB1 542 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 NFE2L3Q9Y4A8 694 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 EYSQ5T1H1 3165 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 MYO7AQ13402 2215 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 COL6A3P12111 3177 aa10.57□□□□□ -0.72
NUP43-202ENST00000367402 ANK1P16157 1881 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 PDCD11Q14690 1871 aaKnown RBP10.56□□□□□ -0.72
NUP43-202ENST00000367402 CCDC195A0A1B0GUA6 201 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 A8MXQ7 604 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 GABRDO14764 452 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 HCRTO43612 131 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 TACC1O75410 805 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 RFPL2O75678 378 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 AFPP02771 609 aaKnown RBP10.56□□□□□ -0.72
NUP43-202ENST00000367402 WEE2P0C1S8 567 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 FAM163BP0C2L3 166 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 LMO2P25791 158 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 PCSK1P29120 753 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 RAP1GAPP47736 663 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 NOP14P78316 857 aaKnown RBP10.56□□□□□ -0.72
NUP43-202ENST00000367402 ITIH3Q06033 890 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 LRMPQ12912 555 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 SMAD4Q13485 552 aaKnown RBP10.56□□□□□ -0.72
NUP43-202ENST00000367402 UVSSAQ2YD98 709 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 ANO6Q4KMQ2 910 aa10.56□□□□□ -0.72
NUP43-202ENST00000367402 PPM1LQ5SGD2 360 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms