RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 RNF180Q86T96 592 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 SLC43A3Q8NBI5 491 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 ERO1AQ96HE7 468 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 HEXIM2Q96MH2 286 aaKnown RBP3.05□□□□□ -1.92
LTN1-201ENST00000361371 PPP1R10Q96QC0 940 aaKnown RBP3.05□□□□□ -1.92
LTN1-201ENST00000361371 MIS12Q9H081 205 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 CRTAC1Q9NQ79 661 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 SAE1Q9UBE0 346 aaPredicted RBP3.05□□□□□ -1.92
LTN1-201ENST00000361371 SAR1BQ9Y6B6 198 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 ANKRD62A6NC57 917 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 ARL5CA6NH57 179 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 A8MXQ7 604 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 E5RJQ4 531 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 ARVCFO00192 962 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 ADAM12O43184 909 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 SOAT2O75908 522 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 ARHGEF15O94989 841 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 HSPA8P11142 646 aaKnown RBP3.05□□□□□ -1.92
LTN1-201ENST00000361371 PYGMP11217 842 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 CCDC130P13994 396 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 IL1R2P27930 398 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 MTM1Q13496 603 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 C9orf57Q5W0N0 161 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 RSRC2Q7L4I2 434 aaKnown RBP3.05□□□□□ -1.92
LTN1-201ENST00000361371 TTC9BQ8N6N2 239 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 SLC17A8Q8NDX2 589 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 OR10T2Q8NGX3 314 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 RNF25Q96BH1 459 aaPredicted RBP3.05□□□□□ -1.92
LTN1-201ENST00000361371 OSBPL9Q96SU4 736 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 SPC25Q9HBM1 224 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 PCSK1NQ9UHG2 260 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 ATP11BQ9Y2G3 1177 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 M0QYV0 167 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 PAPSS1O43252 624 aaPredicted RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 N4BP1O75113 896 aaKnown RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 TACC1O75410 805 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ERBB2P04626 1255 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 GLI1P08151 1106 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 PDE6CP51160 858 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 NKX3-2P78367 333 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ACAD10Q6JQN1 1059 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 SCUBE3Q8IX30 993 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 FUKQ8N0W3 1084 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 PDCL2Q8N4E4 241 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 GPR152Q8TDT2 470 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 RFFLQ8WZ73 363 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 NUP85Q9BW27 656 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 NEUROG2Q9H2A3 272 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ANO9A1A5B4 782 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 RPL17P18621 184 aaKnown RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 GTF2F1P35269 517 aaKnown RBP eCLIP3.04□□□□□ -1.92
LTN1-201ENST00000361371 RBP5P82980 135 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 FAAP100Q0VG06 881 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 PTK7Q13308 1070 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 MAMLD1Q13495 774 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 MON1BQ7L1V2 547 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ATAD1Q8NBU5 361 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 MNS1Q8NEH6 495 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ZNF564Q8TBZ8 553 aaPredicted RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 SLC2A14Q8TDB8 520 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ANKRD36BP1Q96IX9 119 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 NOX5Q96PH1 765 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 CXXC1Q9P0U4 656 aaPredicted RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 CALCOCO1Q9P1Z2 691 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 CNTN3Q9P232 1028 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 TSPAN16Q9UKR8 245 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 UBQLN1Q9UMX0 589 aaKnown RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 C2CD2Q9Y426 696 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 PPME1Q9Y570 386 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 TMEM191CA6NGB0 347 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 KIAA0391O15091 583 aaKnown RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 SASH3O75995 380 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 B3GAT3O94766 335 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 FYNP06241 537 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 EN2P19622 333 aaPredicted RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 MMP8P22894 467 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 NSFP46459 744 aaKnown RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 GPR15P49685 360 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 GPC5P78333 572 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 XKR4Q5GH76 650 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ECHDC2Q86YB7 292 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 PCSK9Q8NBP7 692 aaKnown RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 CTNNBL1Q8WYA6 563 aaPredicted RBP3.04□□□□□ -1.92
LTN1-201ENST00000361371 TMEM176AQ96HP8 235 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 SENP8Q96LD8 212 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 TRIM51Q9BSJ1 452 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 TRIM31Q9BZY9 425 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 CRISPLD1Q9H336 500 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 CHST7Q9NS84 486 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ANAPC7Q9UJX3 599 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 A0A0G2JMZ2 1700 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 TRIM43BA6NCK2 446 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ENPP3O14638 875 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 NRP1O14786 923 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 DEFB103AP81534 67 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 ATP11AP98196 1134 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 CENPCQ03188 943 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 SMTNL2Q2TAL5 461 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 OR6B2Q6IFH4 312 aa3.04□□□□□ -1.92
LTN1-201ENST00000361371 SLFN11Q7Z7L1 901 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms