RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 PRAMEF22A3QJZ6 481 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 C3orf70A6NLC5 250 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 GH1P01241 217 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CLK3P49761 638 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 PRELPP51888 382 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CEBPGP53567 150 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 TGM3Q08188 693 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 STX4Q12846 297 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 USP10Q14694 798 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SEPT2Q15019 361 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SLC13A5Q86YT5 568 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ZNF611Q8N823 705 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 KLHL23Q8NBE8 558 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 UBA3Q8TBC4 463 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 FAM81BQ96LP2 452 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 FAM129BQ96TA1 746 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 PRMT1Q99873 361 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 AVENQ9NQS1 362 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 POLE3Q9NRF9 147 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 C20orf96Q9NUD7 363 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ELOVL2Q9NXB9 296 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 RBAKQ9NYW8 714 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 VGLL3A8MV65 326 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 EPN2O95208 641 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 NTSP30990 170 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SLC11A2P49281 568 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 DGKDQ16760 1214 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 KLHL40Q2TBA0 621 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 C16orf59Q7L2K0 433 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CCDC54Q8NEL0 328 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CALML6Q8TD86 181 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 PMEPA1Q969W9 287 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CPVLQ9H3G5 476 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 RNF121Q9H920 327 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 FANCEQ9HB96 536 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 KLHL20Q9Y2M5 609 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 GSAPA4D1B5 854 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 MYMKA6NI61 221 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 BTBD18B2RXH4 712 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SCAMP3O14828 347 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 DCLK1O15075 740 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CYP2C9P11712 490 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CDK8P49336 464 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ZNF618Q5T7W0 954 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 PADI6Q6TGC4 694 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 TPGS1Q6ZTW0 290 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ARHGEF25Q86VW2 580 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 HDDC3Q8N4P3 179 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ZBTB38Q8NAP3 1195 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 TMEM35BQ8NCS4 154 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 FATE1Q969F0 183 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 FBXO32Q969P5 355 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 MTMR8Q96EF0 704 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 NARS2Q96I59 477 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CGRRF1Q99675 332 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CARD14Q9BXL6 1004 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 XPO4Q9C0E2 1151 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 TASP1Q9H6P5 420 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 MIEF1Q9NQG6 463 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 INTS13Q9NVM9 706 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SMPD4Q9NXE4 827 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SMARCAL1Q9NZC9 954 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 TRPM5Q9NZQ8 1165 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SLC9A2Q9UBY0 812 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 PRKAG3Q9UGI9 489 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 NOVA2Q9UNW9 492 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 PCDHGB3Q9Y5G1 929 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 F5H5T6 163 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 VWA5AO00534 786 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SLC25A12O75746 678 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CETPP11597 493 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 MSH3P20585 1137 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 RRM2P31350 389 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CTNNB1P35222 781 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SOX6P35712 828 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 EIF2S3P41091 472 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 HALP42357 657 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 GSSP48637 474 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 STX3Q13277 289 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CCINQ13939 588 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CYP51A1Q16850 503 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CDK20Q8IZL9 346 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 MTFMTQ96DP5 389 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 WDR41Q9HAD4 459 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 IMPACTQ9P2X3 320 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SUCOQ9UBS9 1254 aaKnown RBP6.04□□□□□ -1.44
BRCA1-203ENST00000357654 VAV3Q9UKW4 847 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ALG6Q9Y672 507 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 CLIC4Q9Y696 253 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 SESN1Q9Y6P5 492 aa6.04□□□□□ -1.44
BRCA1-203ENST00000357654 ZMYM6O95789 1325 aa6.03□□□□□ -1.44
BRCA1-203ENST00000357654 SOS1Q07889 1333 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-203ENST00000357654 TRIM43BA6NCK2 446 aa6.03□□□□□ -1.44
BRCA1-203ENST00000357654 TUBBP07437 444 aa6.03□□□□□ -1.44
BRCA1-203ENST00000357654 PDIA2Q13087 525 aaKnown RBP6.03□□□□□ -1.44
BRCA1-203ENST00000357654 MTFR1Q15390 333 aa6.03□□□□□ -1.44
BRCA1-203ENST00000357654 CTXN3Q4LDR2 81 aa6.03□□□□□ -1.44
BRCA1-203ENST00000357654 DCAF6Q58WW2 860 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms