RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 SMAPO00193 183 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 PROSCO94903 275 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 IL1R1P14778 569 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 LIG4P49917 911 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 PTK7Q13308 1070 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 DGKZQ13574 1117 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 PEX6Q13608 980 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 MOGSQ13724 837 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 LRRC23Q53EV4 343 aaPredicted RBP14.3□□□□□ -0.12
TRIM4-203ENST00000355947 DNAJC24Q6P3W2 148 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 RSPH3Q86UC2 560 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 EMC1Q8N766 993 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 SMC1BQ8NDV3 1235 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 HELQQ8TDG4 1101 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 C7orf43Q8WVR3 580 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 ABTB1Q969K4 478 aaPredicted RBP14.3□□□□□ -0.12
TRIM4-203ENST00000355947 GAKO14976 1311 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 CYB561D2O14569 222 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 DNALI1O14645 258 aaPredicted RBP14.3□□□□□ -0.12
TRIM4-203ENST00000355947 GLRA2P23416 452 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 GSTT1P30711 240 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 RARRES1P49788 294 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 GEMIN4P57678 1058 aaKnown RBP14.3□□□□□ -0.12
TRIM4-203ENST00000355947 CCNG2Q16589 344 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 CDO1Q16878 200 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 MSS51Q4VC12 460 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 TNFAIP8L3Q5GJ75 292 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 TMEM179Q6ZVK1 233 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 PRPF39Q86UA1 669 aaKnown RBP14.3□□□□□ -0.12
TRIM4-203ENST00000355947 RFX6Q8HWS3 928 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 ZCCHC9Q8N567 271 aaKnown RBP14.3□□□□□ -0.12
TRIM4-203ENST00000355947 MORC4Q8TE76 937 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 INPP5DQ92835 1189 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 NDE1Q9NXR1 346 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 ARAP2Q8WZ64 1704 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 LRRIQ4A6NIV6 560 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 CST8O60676 142 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 ZMPSTE24O75844 475 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 PGM3O95394 542 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 ROR2Q01974 943 aaKnown RBP14.3□□□□□ -0.12
TRIM4-203ENST00000355947 WASHC2DQ5SRD0 308 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 RASSF3Q86WH2 238 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 SIAH1Q8IUQ4 282 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 KBTBD2Q8IY47 623 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 SHKBP1Q8TBC3 707 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 APOL6Q9BWW8 343 aa14.3□□□□□ -0.12
TRIM4-203ENST00000355947 PIH1D1Q9NWS0 290 aaKnown RBP14.3□□□□□ -0.12
TRIM4-203ENST00000355947 NFIBO00712 420 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 TJP3O95049 919 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 HLA-DRAP01903 254 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 ITGB5P18084 799 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 PHBP35232 272 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 QARSP47897 775 aaKnown RBP14.29□□□□□ -0.12
TRIM4-203ENST00000355947 RPS6KA3P51812 740 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 PSMC5P62195 406 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 FAAP100Q0VG06 881 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 FNBP1LQ5T0N5 605 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 ZBTB33Q86T24 672 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 ACTL9Q8TC94 416 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 TRIM56Q9BRZ2 755 aaKnown RBP14.29□□□□□ -0.12
TRIM4-203ENST00000355947 EHMT1Q9H9B1 1298 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.29□□□□□ -0.12
TRIM4-203ENST00000355947 KIAA1551Q9HCM1 1747 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 TCRBV7S3A2A0A539 114 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 COPEO14579 308 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 TOP3BO95985 862 aaKnown RBP14.29□□□□□ -0.12
TRIM4-203ENST00000355947 FESP07332 822 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 RFX1P22670 979 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 BRD2P25440 801 aaKnown RBP14.29□□□□□ -0.12
TRIM4-203ENST00000355947 ADSSP30520 456 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 CCNFP41002 786 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 SKIV2L2P42285 1042 aaKnown RBP14.29□□□□□ -0.12
TRIM4-203ENST00000355947 GDF10P55107 478 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 MTERF2Q49AM1 385 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 OLFML2BQ68BL8 750 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 LDHDQ86WU2 507 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 PDIK1LQ8N165 341 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 PIP4K2CQ8TBX8 421 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 SH3TC2Q8TF17 1288 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 MTBPQ96DY7 904 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 ZBTB45Q96K62 511 aaPredicted RBP14.29□□□□□ -0.12
TRIM4-203ENST00000355947 GLIS2Q9BZE0 524 aaPredicted RBP14.29□□□□□ -0.12
TRIM4-203ENST00000355947 UMODL1Q5DID0 1318 aa14.29□□□□□ -0.12
TRIM4-203ENST00000355947 P4HBP07237 508 aaKnown RBP14.28□□□□□ -0.12
TRIM4-203ENST00000355947 ATP6V1B1P15313 513 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 GCAP28676 217 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 OTUD4Q01804 1114 aaKnown RBP14.28□□□□□ -0.12
TRIM4-203ENST00000355947 LPCAT4Q643R3 524 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 CASC4Q6P4E1 433 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 CCDC110Q8TBZ0 833 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 TUBGCP5Q96RT8 1024 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 MOV10L1Q9BXT6 1211 aaKnown RBP14.28□□□□□ -0.12
TRIM4-203ENST00000355947 NXF1Q9UBU9 619 aaKnown RBP14.28□□□□□ -0.12
TRIM4-203ENST00000355947 SEPT9Q9UHD8 586 aaPredicted RBP14.28□□□□□ -0.12
TRIM4-203ENST00000355947 XPO7Q9UIA9 1087 aaKnown RBP14.28□□□□□ -0.12
TRIM4-203ENST00000355947 TRPA1O75762 1119 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 ZWINTO95229 277 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 NPTX2P47972 431 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 SLC25A3Q00325 362 aa14.28□□□□□ -0.12
TRIM4-203ENST00000355947 UBAP2LQ14157 1087 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms