RNA–Protein interactions for RNA: ENST00000350612.10

SUPT20H-201, Transcript of SPT20 homolog, SAGA complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUPT20H, Length 2,739 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-201ENST00000350612 ZNF200P98182 395 aaPredicted RBP16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 GUCY2DQ02846 1103 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 MGAT3Q09327 533 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 CCSAPQ6IQ19 270 aaPredicted RBP16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 DENND1BQ6P3S1 775 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 FAM228AQ86W67 206 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 DDX27Q96GQ7 796 aaKnown RBP16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 BTBD6Q96KE9 485 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 SENP6Q9GZR1 1112 aaPredicted RBP16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 NXF3Q9H4D5 531 aaKnown RBP16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 EPB41L5Q9HCM4 733 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 MED4Q9NPJ6 270 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 SIGLEC16A6NMB1 481 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 O00370 1275 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 PYGMP11217 842 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 CD19P15391 556 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 LRPAP1P30533 357 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 PTPN7P35236 360 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 RNASE9P60153 205 aaKnown RBP16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 COPS2P61201 443 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 IRX5P78411 483 aaPredicted RBP16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 SLC7A5Q01650 507 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 PTPROQ16827 1216 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 MAP3K21Q5TCX8 1036 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 FAM43BQ6ZT52 329 aaPredicted RBP16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 EXD1Q8NHP7 514 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 ZMAT2Q96NC0 199 aaKnown RBP16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 TRAIPQ9BWF2 469 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 CREBZFQ9NS37 354 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 GINS2Q9Y248 185 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 UTP11Q9Y3A2 253 aaKnown RBP16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 SQORQ9Y6N5 450 aa16.51■□□□□ 0.23
SUPT20H-201ENST00000350612 MICAL2O94851 1124 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 CETN2P41208 172 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 SYDE1Q6ZW31 735 aaPredicted RBP16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 DDX56Q9NY93 547 aaKnown RBP16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 IPPQ9Y573 584 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 CDY2AQ9Y6F7 541 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 SMIM28A0A1B0GU29 152 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 PODXLO00592 558 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 ITGA4P13612 1032 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 MARCKSL1P49006 195 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 SMC1AQ14683 1233 aaKnown RBP16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 SV2CQ496J9 727 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 ZNF394Q53GI3 561 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 ARHGAP17Q68EM7 881 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 PAXIP1Q6ZW49 1069 aaPredicted RBP16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 DPH6Q7L8W6 267 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 PXYLP1Q8TE99 480 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 CASKIN2Q8WXE0 1202 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 RBM41Q96IZ5 413 aaKnown RBP16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 CAPNS2Q96L46 248 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 LRRC19Q9H756 370 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 CYLDQ9NQC7 956 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 SLC38A7Q9NVC3 462 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 SRRDQ9UH36 339 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 HPCAL4Q9UM19 191 aa16.5■□□□□ 0.23
SUPT20H-201ENST00000350612 FRMPD3Q5JV73 1810 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 GPR182O15218 404 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 MYBL2P10244 700 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 PAX3P23760 479 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 TNNT3P45378 269 aaPredicted RBP16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 NDST1P52848 882 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 CDH8P55286 799 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 ZNF211Q13398 564 aaPredicted RBP16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 DEFB115Q30KQ5 88 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 FAM26DQ5JW98 314 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 SPDYCQ5MJ68 293 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 ALS2CLQ60I27 953 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 GDF6Q6KF10 455 aaPredicted RBP16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 POLNQ7Z5Q5 900 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 SMG8Q8ND04 991 aaKnown RBP16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 STK32AQ8WU08 396 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 C18orf8Q96DM3 657 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 DDX47Q9H0S4 455 aaKnown RBP16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 CHORDC1Q9UHD1 332 aaPredicted RBP16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 RAB27AP51159 221 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 DR1Q01658 176 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 RCOR2Q8IZ40 523 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 MCRS1Q96EZ8 462 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 TWNKQ96RR1 684 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 TUBGCP4Q9UGJ1 667 aa16.49■□□□□ 0.23
SUPT20H-201ENST00000350612 ECM2O94769 699 aaPredicted RBP16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 PTK7Q13308 1070 aa16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 SIX1Q15475 284 aaPredicted RBP16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 FBXO47Q5MNV8 452 aa16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 CXCL17Q6UXB2 119 aa16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 HEXIM2Q96MH2 286 aaKnown RBP16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 TSEN34Q9BSV6 310 aaKnown RBP16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 SPDYE4A6NLX3 237 aa16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 ZMYND10O75800 440 aa16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 GPD2P43304 727 aa16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 PRMT2P55345 433 aa16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 GABPB1Q06547 395 aaPredicted RBP16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 PTPN20Q4JDL3 420 aa16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 DCUN1D2Q6PH85 259 aa16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 TOP6BLQ8N6T0 577 aa16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 PRELID2Q8N945 189 aa16.48■□□□□ 0.23
SUPT20H-201ENST00000350612 SEZ6LQ9BYH1 1024 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms