RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 CRNNQ9UBG3 495 aaPredicted RBP12.81□□□□□ -0.36
CTNNB1-201ENST00000349496 BCAP29Q9UHQ4 241 aa12.81□□□□□ -0.36
CTNNB1-201ENST00000349496 PCDHB2Q9Y5E7 798 aa12.81□□□□□ -0.36
CTNNB1-201ENST00000349496 COL4A1P02462 1669 aa12.81□□□□□ -0.36
CTNNB1-201ENST00000349496 LAMA4Q16363 1823 aa12.81□□□□□ -0.36
CTNNB1-201ENST00000349496 A0A087X0B3 334 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 LOC105371267A0A1B0GV96 52 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 SMCO2A6NFE2 343 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 USP17L12C9JPN9 530 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 USP17L21D6R901 530 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 MYO1DO94832 1006 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 ACSL3O95573 720 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 TGFB3P10600 412 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 ZNF34Q8IZ26 560 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 POU5F2Q8N7G0 328 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 ESR2Q92731 530 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 MTBPQ96DY7 904 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 PLEKHA8Q96JA3 519 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 ADNPQ9H2P0 1102 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 MRPL39Q9NYK5 338 aaKnown RBP12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 ARPP21Q9UBL0 812 aaPredicted RBP12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 MAFFQ9ULX9 164 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 ADAMTSL3P82987 1691 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 ARHGEF15O94989 841 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 UQCRBP14927 111 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 HADHAP40939 763 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 SLC9A3P48764 834 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 PPP2R2BQ00005 443 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 LONRF1Q17RB8 773 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 SLC9C1Q4G0N8 1177 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 POTEHQ6S545 545 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 RRAGAQ7L523 313 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 SPARTQ8N0X7 666 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 PMM1Q92871 262 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 NLRP4Q96MN2 994 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 TLR10Q9BXR5 811 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 TNKSO95271 1327 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 USP12O75317 370 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 BBOX1O75936 387 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 KRT6AP02538 564 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 KRT6BP04259 564 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 PLEKP08567 350 aaPredicted RBP12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 KRT3P12035 628 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 ST13P50502 369 aaKnown RBP12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 MAP3K10Q02779 954 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 TRIM28Q13263 835 aaKnown RBP12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 TCP11X2Q5H9J9 407 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 HGSNATQ68CP4 663 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 PPP4R4Q6NUP7 873 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 SLC44A5Q8NCS7 719 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 TRPC4APQ8TEL6 797 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 CCDC124Q96CT7 223 aaKnown RBP12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 DYNLL2Q96FJ2 89 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 MAP3K14Q99558 947 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 BTBD10Q9BSF8 475 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 TRIM51Q9BSJ1 452 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 DNAJC16Q9Y2G8 782 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 SIK3Q9Y2K2 1263 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 MROH7Q68CQ1 1323 aa12.8□□□□□ -0.36
CTNNB1-201ENST00000349496 KLRF2D3W0D1 207 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 H0YGN5 161 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 VILLO15195 856 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 SIN3BO75182 1162 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 KATNA1O75449 491 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 BAIAP3O94812 1187 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 FGFR2P21802 821 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 GRIK5Q16478 980 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 LPCAT4Q643R3 524 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 RALGPS2Q86X27 583 aaPredicted RBP12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 CLIP4Q8N3C7 705 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 MB21D1Q8N884 522 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 KCTD4Q8WVF5 259 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 GPKOWQ92917 476 aaPredicted RBP eCLIP12.79□□□□□ -0.367e-6■□□□□ 10
CTNNB1-201ENST00000349496 CSRNP2Q9H175 543 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 COQ3Q9NZJ6 369 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 KIAA1522Q9P206 1035 aaPredicted RBP12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 RPL26L1Q9UNX3 145 aaKnown RBP12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 NFS1Q9Y697 457 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 PHRF1Q9P1Y6 1649 aaKnown RBP12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 SLIT2O94813 1529 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 PGRMC1O00264 195 aaKnown RBP12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 PIK3CDO00329 1044 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 GRIA2P42262 883 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 TXNRD1Q16881 649 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 C11orf96Q7Z7L8 435 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 CCDC28AQ8IWP9 274 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 CIB1Q99828 191 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 NEUROG2Q9H2A3 272 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 NPHS2Q9NP85 383 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 CAMTA2O94983 1202 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 ABCB1P08183 1280 aaPredicted RBP12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 EPHB1P54762 984 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 GNG2P59768 71 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 UBE3CQ15386 1083 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 ALKBH2Q6NS38 261 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 NELFCDQ8IXH7 590 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 ZNF654Q8IZM8 581 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 PSD4Q8NDX1 1056 aa12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 EFHD2Q96C19 240 aaPredicted RBP12.79□□□□□ -0.36
CTNNB1-201ENST00000349496 TLCD1Q96CP7 247 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms