RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 GOLGA8RI6L899 631 aa19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 MAFGO15525 162 aa19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 DIAPH2O60879 1101 aa19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 CA4P22748 312 aa19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 ORC1Q13415 861 aa19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 OASLQ15646 514 aaKnown RBP19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 RNASEH2BQ5TBB1 312 aaKnown RBP19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 RNF43Q68DV7 783 aa19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 DNAJC24Q6P3W2 148 aa19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 GBP7Q8N8V2 638 aaPredicted RBP19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 TCHPQ9BT92 498 aa19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 EBF2Q9HAK2 575 aa19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 HAO1Q9UJM8 370 aa19.08■□□□□ 0.65
PTP4A3-202ENST00000349124 hCG_1818297A0A087WSY0 165 aa19.08■□□□□ 0.64
PTP4A3-202ENST00000349124 TCRBV5S1A1TA0A578 114 aa19.08■□□□□ 0.64
PTP4A3-202ENST00000349124 CDR2LQ86X02 465 aaPredicted RBP19.08■□□□□ 0.64
PTP4A3-202ENST00000349124 KIAA0319LQ8IZA0 1049 aa19.08■□□□□ 0.64
PTP4A3-202ENST00000349124 ALG13Q9NP73 1137 aaKnown RBP19.08■□□□□ 0.64
PTP4A3-202ENST00000349124 ZNF302Q9NR11 478 aa19.08■□□□□ 0.64
PTP4A3-202ENST00000349124 TCRBV7S3A2A0A539 114 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 ALADP13716 330 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 HMGB2P26583 209 aaKnown RBP19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 ARL2P36404 184 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 CDKN2BP42772 138 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 TFDP1Q14186 410 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 FNBP1LQ5T0N5 605 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 ARFGAP1Q8N6T3 406 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 DHX33Q9H6R0 707 aaKnown RBP19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 CISHQ9NSE2 258 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 ACTL7BQ9Y614 415 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 ADGRA2Q96PE1 1338 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 ALOX15BO15296 676 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 UNC5CO95185 931 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 ABHD2P08910 425 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 CD48P09326 243 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 IL1R2P27930 398 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 RFC1P35251 1148 aaPredicted RBP19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 VCPP55072 806 aaKnown RBP19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 TGFB2P61812 414 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 MKRN3Q13064 507 aaKnown RBP19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 CCDC142Q17RM4 750 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 VSIG1Q86XK7 387 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 KCNV2Q8TDN2 545 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 RBM41Q96IZ5 413 aaKnown RBP19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 NUMBLQ9Y6R0 609 aa19.07■□□□□ 0.64
PTP4A3-202ENST00000349124 CLUHO75153 1309 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 OATP04181 439 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 KRT4P19013 534 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 CETN2P41208 172 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 ZNF132P52740 706 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 CLNS1AP54105 237 aaKnown RBP19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 OSTNP61366 133 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 EN1Q05925 392 aaPredicted RBP19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 CAPSQ13938 189 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 XRRA1Q6P2D8 792 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 ZNF449Q6P9G9 518 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 JOSD2Q8TAC2 188 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 SMC6Q96SB8 1091 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 WDR83Q9BRX9 315 aaKnown RBP19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 DKC1O60832 514 aaKnown RBP eCLIP19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 CBX6O95503 412 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 TAF5Q15542 800 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 TFDP3Q5H9I0 405 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 CIAPIN1Q6FI81 312 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 EMC1Q8N766 993 aa19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 MAFBQ9Y5Q3 323 aaPredicted RBP19.06■□□□□ 0.64
PTP4A3-202ENST00000349124 ASS1P00966 412 aaKnown RBP19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 TBXAS1P24557 533 aaPredicted RBP19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 NAMPTP43490 491 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 LMNB2Q03252 620 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 MOGSQ13724 837 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 SPARCL1Q14515 664 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 ACTL9Q8TC94 416 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 SLC7A3Q8WY07 619 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 NKX1-2Q9UD57 310 aaPredicted RBP19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 CYTH4Q9UIA0 394 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 C15orf41Q9Y2V0 281 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 SRGAP2CP0DJJ0 459 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 T-ENOLP0DO92 83 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 CCNB1P14635 433 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 SLFN12LQ6IEE8 588 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 DENND1BQ6P3S1 775 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 LVRNQ6Q4G3 990 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 UBR7Q8N806 425 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 PCYT2Q99447 389 aa19.05■□□□□ 0.64
PTP4A3-202ENST00000349124 C3orf70A6NLC5 250 aaPredicted RBP19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 CTCFP49711 727 aaPredicted RBP19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 OTUD4Q01804 1114 aaKnown RBP19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 OVGP1Q12889 678 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 MAPK6Q16659 721 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 PLEKHG4Q58EX7 1191 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 EEPD1Q7L9B9 569 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 PRPF31Q8WWY3 499 aaKnown RBP19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 ZBTB10Q96DT7 871 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 WRNIP1Q96S55 665 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 PCSK1NQ9UHG2 260 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 HACL1Q9UJ83 578 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 STARD13Q9Y3M8 1113 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 NFASCO94856 1347 aa19.04■□□□□ 0.64
PTP4A3-202ENST00000349124 EIF4E1BA6NMX2 242 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms